RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
RORA-207ENST00000558234 MEIS1O00470 390 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 PLS1Q14651 629 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
RORA-207ENST00000558234 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
RORA-207ENST00000558234 FLT3LGP49771 235 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 NDUFA8P51970 172 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 TIGD1Q96MW7 591 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 NUDT12Q9BQG2 462 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 XRCC6P12956 609 aaKnown RBP eCLIP13.05□□□□□ -0.32
RORA-207ENST00000558234 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 KRT25Q7Z3Z0 450 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 UPF3AQ9H1J1 476 aaKnown RBP13.05□□□□□ -0.32
RORA-207ENST00000558234 BIN2Q9UBW5 565 aaPredicted RBP13.05□□□□□ -0.32
RORA-207ENST00000558234 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
RORA-207ENST00000558234 FAM160A1Q05DH4 1040 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 TINF2Q9BSI4 451 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
RORA-207ENST00000558234 SPATA31C2B4DYI2 1134 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 LBX1P52954 281 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 KCTD2Q14681 263 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
RORA-207ENST00000558234 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 A0A087X0B3 334 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 TNPO2O14787 897 aaKnown RBP13.04□□□□□ -0.32
RORA-207ENST00000558234 CUTAO60888 179 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 DACT1Q9NYF0 836 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 SYCE3A1L190 88 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 CFBP00751 764 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 TRIM29Q14134 588 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 NT5DC1Q5TFE4 455 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 HAS1Q92839 578 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 JADE2Q9NQC1 790 aa13.04□□□□□ -0.32
RORA-207ENST00000558234 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
RORA-207ENST00000558234 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
RORA-207ENST00000558234 KCNA2P16389 499 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 NLRP5P59047 1200 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 SP2Q02086 613 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 E2F4Q16254 413 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 CCAR1Q8IX12 1150 aaKnown RBP13.03□□□□□ -0.32
RORA-207ENST00000558234 ANKRD35Q8N283 1001 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 RMDN3Q96TC7 470 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 TANC1Q9C0D5 1861 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 PTCH2Q9Y6C5 1203 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 LTBP2Q14767 1821 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 ARIH2O95376 493 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 NR3C2P08235 984 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
RORA-207ENST00000558234 TRIM32Q13049 653 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
RORA-207ENST00000558234 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 SLC37A4O43826 429 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 LETM1O95202 739 aaPredicted RBP13.03□□□□□ -0.32
RORA-207ENST00000558234 SLC5A5Q92911 643 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 MXRA8Q9BRK3 442 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 GZF1Q9H116 711 aaPredicted RBP13.03□□□□□ -0.32
RORA-207ENST00000558234 NFASCO94856 1347 aa13.03□□□□□ -0.32
RORA-207ENST00000558234 POTEB2H3BUK9 544 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 PFKFB1P16118 471 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 XBP1P17861 261 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.32
RORA-207ENST00000558234 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.32
RORA-207ENST00000558234 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 CTU1Q7Z7A3 348 aaKnown RBP13.02□□□□□ -0.32
RORA-207ENST00000558234 SLAIN1Q8ND83 568 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 GPRASP2Q96D09 838 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.02□□□□□ -0.32
RORA-207ENST00000558234 VAV3Q9UKW4 847 aa13.02□□□□□ -0.32
RORA-207ENST00000558234 ASB14A6NK59 587 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.33
RORA-207ENST00000558234 ARL6IP4Q66PJ3 421 aaKnown RBP13.02□□□□□ -0.33
RORA-207ENST00000558234 CYP2W1Q8TAV3 490 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 LRRC15Q8TF66 581 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 MRPS27Q92552 414 aaKnown RBP13.02□□□□□ -0.33
RORA-207ENST00000558234 ZNF333Q96JL9 665 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 CLIC6Q96NY7 704 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 TUBE1Q9UJT0 475 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 PRPHP41219 470 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 CACNB2Q08289 660 aaPredicted RBP13.02□□□□□ -0.33
RORA-207ENST00000558234 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.33
RORA-207ENST00000558234 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
RORA-207ENST00000558234 LHX8Q68G74 356 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 NSMFQ6X4W1 530 aa13.02□□□□□ -0.33
RORA-207ENST00000558234 ADD3Q9UEY8 706 aaKnown RBP13.02□□□□□ -0.33
RORA-207ENST00000558234 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
RORA-207ENST00000558234 SARSP49591 514 aaKnown RBP13.01□□□□□ -0.33
RORA-207ENST00000558234 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
RORA-207ENST00000558234 ITGB3BPQ13352 177 aaPredicted RBP13.01□□□□□ -0.33
RORA-207ENST00000558234 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
RORA-207ENST00000558234 IGKV6D-21A0A0A0MT36 114 aa13.01□□□□□ -0.33
RORA-207ENST00000558234 ATG7O95352 703 aa13.01□□□□□ -0.33
RORA-207ENST00000558234 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
RORA-207ENST00000558234 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms