RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 KIF2BQ8N4N8 673 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 SCAIQ8N9R8 606 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 HAUS1Q96CS2 278 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 PSTPIP2Q9H939 334 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 EURLQ9NYK6 297 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 CNOT8Q9UFF9 292 aaKnown RBP12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 SAR1BQ9Y6B6 198 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 MYH2Q9UKX2 1941 aa12.04□□□□□ -0.48
SEMA4B-204ENST00000558065 TEX28O15482 410 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 GALK1P51570 392 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 CRY1Q16526 586 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 GALNTL6Q49A17 601 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 AGAP9Q5VTM2 703 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 ARFGAP2Q8N6H7 521 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 FBF1Q8TES7 1133 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 ZNF333Q96JL9 665 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 XPO6Q96QU8 1125 aaKnown RBP12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 LRRC1Q9BTT6 524 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 PPP1R12CQ9BZL4 782 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 SAMSN1Q9NSI8 373 aaKnown RBP12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 LRCH1Q9Y2L9 728 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 TNFRSF8P28908 595 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 NDUFA8P51970 172 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 SH3BGRP55822 239 aaPredicted RBP12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 CPLX4Q7Z7G2 160 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 CASP10Q92851 521 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 TMBIM4Q9HC24 238 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 TSC22D4Q9Y3Q8 395 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 LOC105371267A0A1B0GV96 52 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 VAMP4O75379 141 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 UBOX5O94941 541 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 LACTBP83111 547 aaPredicted RBP12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 CKAP4Q07065 602 aaKnown RBP12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 CCDC152Q4G0S7 254 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 GRAMD2AQ8IUY3 354 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 DCLK2Q8N568 766 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 ANKS4BQ8N8V4 417 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 APPBP2Q92624 585 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 CCDC127Q96BQ5 260 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 MIS12Q9H081 205 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 ECT2Q9H8V3 914 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 STK38LQ9Y2H1 464 aa12.03□□□□□ -0.48
SEMA4B-204ENST00000558065 AKR1B15C9JRZ8 316 aaPredicted RBP12.02□□□□□ -0.48
SEMA4B-204ENST00000558065 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.48
SEMA4B-204ENST00000558065 DEPDC1Q5TB30 811 aa12.02□□□□□ -0.48
SEMA4B-204ENST00000558065 PIGWQ7Z7B1 504 aa12.02□□□□□ -0.48
SEMA4B-204ENST00000558065 MMGT1Q8N4V1 131 aa12.02□□□□□ -0.48
SEMA4B-204ENST00000558065 CYP1A2P05177 515 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 FECHP22830 423 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 PTDSS1P48651 473 aaKnown RBP12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 PDCD4Q53EL6 469 aaKnown RBP12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 SLC17A8Q8NDX2 589 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 TRPC4APQ8TEL6 797 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 STK32AQ8WU08 396 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 GPR101Q96P66 508 aaPredicted RBP12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 RXRGP48443 463 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 LIN52Q52LA3 116 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 USP28Q96RU2 1077 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 NDEL1Q9GZM8 345 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 PLCB1Q9NQ66 1216 aa12.02□□□□□ -0.49
SEMA4B-204ENST00000558065 ZNF185O15231 689 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 PRPF3O43395 683 aaKnown RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 GBP1P32455 592 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 SLC16A2P36021 539 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 TXKP42681 527 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 TBL3Q12788 808 aaKnown RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 E2F2Q14209 437 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 KIF22Q14807 665 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 FKBP15Q5T1M5 1219 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 MREGQ8N565 214 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 ENDOVQ8N8Q3 282 aaKnown RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 RBBP8NLQ8NC74 664 aaPredicted RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 MRPS27Q92552 414 aaKnown RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 BRF1Q92994 677 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 CTTNBP2NLQ9P2B4 639 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 KIAA1257Q9ULG3 409 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 LCA5LO95447 670 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 GM2AP17900 193 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 ARFIP2P53365 341 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 RCN2Q14257 317 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 SPATA24Q86W54 205 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 RAB11FIP4Q86YS3 637 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 DNAJC1Q96KC8 554 aaKnown RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 EGLN2Q96KS0 407 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 ZNF317Q96PQ6 595 aaPredicted RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 TM6SF1Q9BZW5 370 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 TRIM10Q9UDY6 481 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 PCDHB2Q9Y5E7 798 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 ADGRF5Q8IZF2 1346 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 SLC3A2P08195 630 aaKnown RBP12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 FAM153BP0C7A2 387 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 FAM153CQ494X1 144 aa12.01□□□□□ -0.49
SEMA4B-204ENST00000558065 CACNA2D4Q7Z3S7 1137 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms