RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LNPKQ9C0E8 428 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 ZNF652Q9Y2D9 606 aa6.86□□□□□ -1.31
VRK1-207ENST00000557352 HGSO14964 777 aaPredicted RBP6.85□□□□□ -1.31
VRK1-207ENST00000557352 RPL13P26373 211 aaKnown RBP6.85□□□□□ -1.31
VRK1-207ENST00000557352 ITGA1P56199 1179 aa6.85□□□□□ -1.31
VRK1-207ENST00000557352 MAP4K2Q12851 820 aa6.85□□□□□ -1.31
VRK1-207ENST00000557352 DDR2Q16832 855 aa6.85□□□□□ -1.31
VRK1-207ENST00000557352 CR1LQ2VPA4 569 aa6.85□□□□□ -1.31
VRK1-207ENST00000557352 TTLL6Q8N841 843 aa6.85□□□□□ -1.31
VRK1-207ENST00000557352 CLDND1Q9NY35 253 aa6.85□□□□□ -1.31
VRK1-207ENST00000557352 KLF4O43474 513 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 TADA3O75528 432 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 CNR2P34972 360 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 CHRNA2Q15822 529 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 EMC4Q5J8M3 183 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 ARRDC4Q8NCT1 418 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 KCTD13Q8WZ19 329 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 IER2Q9BTL4 223 aa6.84□□□□□ -1.31
VRK1-207ENST00000557352 NGRNQ9NPE2 291 aaKnown RBP6.84□□□□□ -1.31
VRK1-207ENST00000557352 TCRBV5S2A0A599 114 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 DLX3O60479 287 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 ADRB1P08588 477 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
VRK1-207ENST00000557352 NKX3-2P78367 333 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 PRR31Q5SQ13 230 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 STEAP3Q658P3 488 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.83□□□□□ -1.32
VRK1-207ENST00000557352 YIPF4Q9BSR8 244 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
VRK1-207ENST00000557352 DGKIO75912 1065 aa6.82□□□□□ -1.32
VRK1-207ENST00000557352 RGL3Q3MIN7 710 aa6.82□□□□□ -1.32
VRK1-207ENST00000557352 SGSM3Q96HU1 749 aa6.82□□□□□ -1.32
VRK1-207ENST00000557352 EPB41L1Q9H4G0 881 aa6.82□□□□□ -1.32
VRK1-207ENST00000557352 GPR27Q9NS67 375 aa6.82□□□□□ -1.32
VRK1-207ENST00000557352 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
VRK1-207ENST00000557352 PCDHB4Q9Y5E5 795 aa6.82□□□□□ -1.32
VRK1-207ENST00000557352 MSCO60682 206 aa6.81□□□□□ -1.32
VRK1-207ENST00000557352 ADAM9Q13443 819 aa6.81□□□□□ -1.32
VRK1-207ENST00000557352 HSP90AA2PQ14568 343 aaPredicted RBP6.81□□□□□ -1.32
VRK1-207ENST00000557352 SPATS1Q496A3 300 aa6.81□□□□□ -1.32
VRK1-207ENST00000557352 FAM26FQ5R3K3 315 aa6.81□□□□□ -1.32
VRK1-207ENST00000557352 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
VRK1-207ENST00000557352 USP53Q70EK8 1073 aa6.81□□□□□ -1.32
VRK1-207ENST00000557352 TOE1Q96GM8 510 aaKnown RBP6.81□□□□□ -1.32
VRK1-207ENST00000557352 DTLQ9NZJ0 730 aa6.81□□□□□ -1.32
VRK1-207ENST00000557352 DDX3XO00571 662 aaKnown RBP eCLIP6.8□□□□□ -1.32
VRK1-207ENST00000557352 PHF20Q9BVI0 1012 aa6.8□□□□□ -1.32
VRK1-207ENST00000557352 JAM3Q9BX67 310 aa6.8□□□□□ -1.32
VRK1-207ENST00000557352 CNOT11Q9UKZ1 510 aaKnown RBP6.8□□□□□ -1.32
VRK1-207ENST00000557352 K7ESM1 405 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 LRG1P02750 347 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 KIAA2012Q0VF49 1180 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 RAB33AQ14088 237 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 TEPPQ6URK8 271 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 HHIPL2Q6UWX4 724 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 RSPO2Q6UXX9 243 aaPredicted RBP6.79□□□□□ -1.32
VRK1-207ENST00000557352 TXNDC5Q8NBS9 432 aaKnown RBP6.79□□□□□ -1.32
VRK1-207ENST00000557352 AARSD1Q9BTE6 412 aaKnown RBP6.79□□□□□ -1.32
VRK1-207ENST00000557352 SMOC1Q9H4F8 434 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 ARHGEF4Q9NR80 690 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 MYOTQ9UBF9 498 aa6.79□□□□□ -1.32
VRK1-207ENST00000557352 PPARGC1AQ9UBK2 798 aaKnown RBP6.79□□□□□ -1.32
VRK1-207ENST00000557352 IQCA1LA6NCM1 817 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 MROH6A6NGR9 719 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 PRODHO43272 600 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 ITGB3P05106 788 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 FGFR1P11362 822 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 ST13P5Q8NFI4 369 aaPredicted RBP6.78□□□□□ -1.32
VRK1-207ENST00000557352 PHOSPHO1Q8TCT1 267 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 ZSWIM3Q96MP5 696 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.32
VRK1-207ENST00000557352 SLC6A20Q9NP91 592 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 ASH2LQ9UBL3 628 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 WASF3Q9UPY6 502 aa6.78□□□□□ -1.32
VRK1-207ENST00000557352 KRIT1O00522 736 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 MAFKO60675 156 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 PABPC1P11940 636 aaKnown RBP6.77□□□□□ -1.33
VRK1-207ENST00000557352 ZNF28P17035 718 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 NTRK3Q16288 839 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 CYP4F22Q6NT55 531 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 KCNT2Q6UVM3 1135 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 PIP4K2CQ8TBX8 421 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 DCAF4Q8WV16 495 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 OSBP2Q969R2 916 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 INVSQ9Y283 1065 aa6.77□□□□□ -1.33
VRK1-207ENST00000557352 SLC27A2O14975 620 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 MLLT6P55198 1093 aaPredicted RBP6.76□□□□□ -1.33
VRK1-207ENST00000557352 TBC1D10BQ4KMP7 808 aaPredicted RBP6.76□□□□□ -1.33
VRK1-207ENST00000557352 PRAMEF18Q5VWM3 479 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 NSMFQ6X4W1 530 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 LBX2Q6XYB7 198 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 FAM124AQ86V42 546 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 LGI4Q8N135 537 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 LCORQ96JN0 433 aaPredicted RBP6.76□□□□□ -1.33
VRK1-207ENST00000557352 CLIC6Q96NY7 704 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 HSPBP1Q9NZL4 362 aa6.76□□□□□ -1.33
VRK1-207ENST00000557352 PLATP00750 562 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 IL13P35225 146 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 ZXDCQ2QGD7 858 aaPredicted RBP6.75□□□□□ -1.33
VRK1-207ENST00000557352 YOD1Q5VVQ6 348 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms