RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
SRP54-213ENST00000556994 KLRC1P26715 233 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
SRP54-213ENST00000556994 GUCY1A3Q02108 690 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 EHHADHQ08426 723 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 ECM1Q16610 540 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 PTPROQ16827 1216 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 COBLL1Q53SF7 1204 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 IFT20Q8IY31 132 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 REXO1Q8N1G1 1221 aaKnown RBP12.58□□□□□ -0.4
SRP54-213ENST00000556994 PROCA1Q8NCQ7 364 aaPredicted RBP12.58□□□□□ -0.4
SRP54-213ENST00000556994 IQCDQ96DY2 449 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 PACSIN1Q9BY11 444 aa12.58□□□□□ -0.4
SRP54-213ENST00000556994 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
SRP54-213ENST00000556994 FRMPD2Q68DX3 1309 aaPredicted RBP12.57□□□□□ -0.4
SRP54-213ENST00000556994 TRAF5O00463 557 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 EDIL3O43854 480 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 NOL4O94818 638 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 CLEC4GQ6UXB4 293 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 DNAAF5Q86Y56 855 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 SNX29Q8TEQ0 813 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 TBC1D5Q92609 795 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 RNPC3Q96LT9 517 aaKnown RBP12.57□□□□□ -0.4
SRP54-213ENST00000556994 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 MTMR9Q96QG7 549 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 EYA3Q99504 573 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 SPZ1Q9BXG8 430 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 FGFBP2Q9BYJ0 223 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 SSBP05455 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
SRP54-213ENST00000556994 CDK8P49336 464 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 SLC9C1Q4G0N8 1177 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
SRP54-213ENST00000556994 NELFCDQ8IXH7 590 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 CASKIN2Q8WXE0 1202 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 RUBCNQ92622 972 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 RAD54LQ92698 747 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
SRP54-213ENST00000556994 GDF3Q9NR23 364 aa12.57□□□□□ -0.4
SRP54-213ENST00000556994 SRP68Q9UHB9 627 aaKnown RBP12.57□□□□□ -0.4
SRP54-213ENST00000556994 FGFR1OPO95684 399 aaKnown RBP12.56□□□□□ -0.4
SRP54-213ENST00000556994 INPP5BP32019 993 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 SKOR1P84550 965 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
SRP54-213ENST00000556994 LRRC63Q05C16 580 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 SFMBT2Q5VUG0 894 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 KLHL7Q8IXQ5 586 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 IQCKQ8N0W5 287 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 PIK3R5Q8WYR1 880 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 LZTS2Q9BRK4 669 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 FAM107BQ9H098 131 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 GOLPH3Q9H4A6 298 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 ANKIB1Q9P2G1 1089 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 ADAMTS1Q9UHI8 967 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 CCDC88AQ3V6T2 1871 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 A0A087X0T9 212 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 SSU72P8A0A1W2PR75 194 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 FAM228BP0C875 321 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 RAPGEF1Q13905 1077 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 RNF10Q8N5U6 811 aaKnown RBP12.56□□□□□ -0.4
SRP54-213ENST00000556994 TSG101Q99816 390 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 STK17AQ9UEE5 414 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 COL4A3BPQ9Y5P4 624 aa12.56□□□□□ -0.4
SRP54-213ENST00000556994 BAG3O95817 575 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 TNFRSF8P28908 595 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 SEC24CP53992 1094 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
SRP54-213ENST00000556994 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 TMEM266Q2M3C6 531 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 GLE1Q53GS7 698 aaKnown RBP12.55□□□□□ -0.4
SRP54-213ENST00000556994 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 MMS22LQ6ZRQ5 1243 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
SRP54-213ENST00000556994 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 FAM133AQ8N9E0 248 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 CENPHQ9H3R5 247 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 NPHP3-ACAD11A0A0J9YXS1 232 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 RAD51CO43502 376 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 SERPING1P05155 500 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 COASYQ13057 564 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 PAK2Q13177 524 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 NAB2Q15742 525 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 UBE2SQ16763 222 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 CEP72Q9P209 647 aa12.55□□□□□ -0.4
SRP54-213ENST00000556994 RBAK-RBAKDNI3L0D1 243 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 HNRNPH1P31943 449 aaKnown RBP12.54□□□□□ -0.4
SRP54-213ENST00000556994 LSP1P33241 339 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 TNNI2P48788 182 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■□□ 15.9
SRP54-213ENST00000556994 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
SRP54-213ENST00000556994 MEI1Q5TIA1 1274 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 MAATS1Q7Z4T9 603 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms