RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 TRIM44Q96DX7 344 aaPredicted RBP8.88□□□□□ -0.99
LINC00641-202ENST00000555688 UBA5Q9GZZ9 404 aa8.88□□□□□ -0.99
LINC00641-202ENST00000555688 ZMYND12Q9H0C1 365 aa8.88□□□□□ -0.99
LINC00641-202ENST00000555688 CSRNP2Q9H175 543 aa8.88□□□□□ -0.99
LINC00641-202ENST00000555688 ANO10Q9NW15 660 aa8.88□□□□□ -0.99
LINC00641-202ENST00000555688 TUBE1Q9UJT0 475 aa8.88□□□□□ -0.99
LINC00641-202ENST00000555688 PCDHA6Q9UN73 950 aa8.88□□□□□ -0.99
LINC00641-202ENST00000555688 PCDHA8Q9Y5H6 950 aa8.88□□□□□ -0.99
LINC00641-202ENST00000555688 SERTM1A2A2V5 107 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-202ENST00000555688 ATP2C1P98194 919 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-202ENST00000555688 ZNF543Q08ER8 600 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 IL17AQ16552 155 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 GALNT17Q6IS24 598 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 TMEM214Q6NUQ4 689 aaKnown RBP8.87□□□□□ -0.99
LINC00641-202ENST00000555688 MRPL14Q6P1L8 145 aaKnown RBP8.87□□□□□ -0.99
LINC00641-202ENST00000555688 KRBA2Q6ZNG9 492 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 RASGRP4Q8TDF6 673 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 RHBDD1Q8TEB9 315 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 MKL1Q969V6 931 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 PIGSQ96S52 555 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
LINC00641-202ENST00000555688 PIM2Q9P1W9 311 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 NOL7Q9UMY1 257 aaKnown RBP8.87□□□□□ -0.99
LINC00641-202ENST00000555688 MYH4Q9Y623 1939 aa8.87□□□□□ -0.99
LINC00641-202ENST00000555688 FRMPD2Q68DX3 1309 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-202ENST00000555688 GFRA3O60609 400 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 BMP15O95972 392 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 ABL1P00519 1130 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 NOS2P35228 1153 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 JAG1P78504 1218 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 RRP1BQ14684 758 aaKnown RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 ASPRV1Q53RT3 343 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 HEATR3Q7Z4Q2 680 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 DHX40Q8IX18 779 aaKnown RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 CCDC148Q8NFR7 591 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 FERMT2Q96AC1 680 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 RRP36Q96EU6 259 aaKnown RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 POLMQ9NP87 494 aaPredicted RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 ZNRF3Q9ULT6 936 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 BRCA1P38398 1863 aaKnown RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 COL2A1P02458 1487 aaPredicted RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 A0A087X0B3 334 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 EML1O00423 815 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 FOXN1O15353 648 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 POLR2DO15514 142 aaKnown RBP8.86□□□□□ -0.99
LINC00641-202ENST00000555688 BMP2P12643 396 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 NLRP12P59046 1061 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 DPCR1Q3MIW9 517 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 TTBK2Q6IQ55 1244 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 ZDHHC1Q8WTX9 485 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 MTMR8Q96EF0 704 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 EPSTI1Q96J88 318 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 MTFR1LQ9H019 292 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 FAM13BQ9NYF5 915 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 NYAP2Q9P242 653 aa8.86□□□□□ -0.99
LINC00641-202ENST00000555688 FER1L6Q2WGJ9 1857 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 ESYT2A0FGR8 921 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 SMCO2A6NFE2 343 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 MPHOSPH10O00566 681 aaKnown RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 ICMTO60725 284 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 EEF2P13639 858 aaKnown RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 SARSP49591 514 aaKnown RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 CXCL9Q07325 125 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 PNOCQ13519 176 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 NAA30Q147X3 362 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 PKDCCQ504Y2 493 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 GNASQ5JWF2 1037 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 SOGA3Q5TF21 947 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 ZSCAN30Q86W11 494 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 HOMER1Q86YM7 354 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 ZSCAN29Q8IWY8 852 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 ADGRF4Q8IZF3 695 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 CRIPAKQ8N1N5 446 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 CNNM3Q8NE01 707 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 ZBED3Q96IU2 234 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 BPIFA3Q9BQP9 254 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 KANSL2Q9H9L4 492 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 JMJD4Q9H9V9 463 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 ZNF70Q9UC06 446 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 PCDHA5Q9Y5H7 936 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
LINC00641-202ENST00000555688 CNTNAP1P78357 1384 aa8.85□□□□□ -0.99
LINC00641-202ENST00000555688 SPATA31C2B4DYI2 1134 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 BIN1O00499 593 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 EDIL3O43854 480 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 PPP1R11O60927 126 aaPredicted RBP8.84□□□□□ -0.99
LINC00641-202ENST00000555688 BMP6P22004 513 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 MCM7P33993 719 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 NAPAP54920 295 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 LAPTM4AQ15012 233 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 SEPT2Q15019 361 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 DLGAP5Q15398 846 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 DALRD3Q5D0E6 543 aaKnown RBP8.84□□□□□ -0.99
LINC00641-202ENST00000555688 NT5DC1Q5TFE4 455 aa8.84□□□□□ -0.99
LINC00641-202ENST00000555688 ARL6IP4Q66PJ3 421 aaKnown RBP8.84□□□□□ -0.99
LINC00641-202ENST00000555688 C16orf46Q6P387 395 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms