RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 NAA35Q5VZE5 725 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 PPP4R3AQ6IN85 833 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 CYP26C1Q6V0L0 522 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 ELMO3Q96BJ8 720 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 PURBQ96QR8 312 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 CCDC113Q9H0I3 377 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 PALM3A6NDB9 673 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 SRGAP2O75044 1071 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 CETN1Q12798 172 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 ARMCX3Q9UH62 379 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 GYS2P54840 703 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 Q3C1V9 767 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 RSBN1LQ6PCB5 846 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 LDHDQ86WU2 507 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 IFIH1Q9BYX4 1025 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 EPN1Q9Y6I3 576 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 MYMKA6NI61 221 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 FXR1P51114 621 aaKnown RBP eCLIP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 TCP11X2Q5H9J9 407 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 GALNT17Q6IS24 598 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 TRIML1Q8N9V2 468 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 FAM107BQ9H098 131 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 DEFB129Q9H1M3 183 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 MYO1AQ9UBC5 1043 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 KCPQ6ZWJ8 1503 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 IL1R1P14778 569 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 BMP6P22004 513 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 ERCC5P28715 1186 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 NBPF12Q5TAG4 269 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 TAX1BP1Q86VP1 789 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 GLIS3Q8NEA6 775 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 VTI1AQ96AJ9 217 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 DCPSQ96C86 337 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 ALS2CR12Q96Q35 445 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 GGA3Q9NZ52 723 aa13.48□□□□□ -0.25
ARHGEF40-206ENST00000555232 LRRIQ4A6NIV6 560 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 TRIM66O15016 1216 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 XRCC5P13010 732 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 MTERF2Q49AM1 385 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 SNRNP48Q6IEG0 339 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 STXBP4Q6ZWJ1 553 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 FAM133AQ8N9E0 248 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 TRIM9Q9C026 710 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 TSPYL1Q9H0U9 437 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 TTC26A0AVF1 554 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 SMIM23A6NLE4 172 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 TFRCP02786 760 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 RASSF4Q9H2L5 321 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 USP20Q9Y2K6 914 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 TMEM150BA6NC51 233 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 TACC1O75410 805 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 NMT1P30419 496 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 CYFIP1Q7L576 1253 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 KLHL7Q8IXQ5 586 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 AGPAT5Q9NUQ2 364 aa13.47□□□□□ -0.25
ARHGEF40-206ENST00000555232 RSPH10B2B2RC85 870 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 RSPH10BP0C881 870 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 PMS1P54277 932 aaKnown RBP13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 APBA1Q02410 837 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 HHIPL2Q6UWX4 724 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 PPM1KQ8N3J5 372 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 SEPT9Q9UHD8 586 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 ADAMTS1Q9UHI8 967 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 RPL13P26373 211 aaKnown RBP13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 KRT83P78385 493 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 ZC2HC1CQ53FD0 456 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 DACT2Q5SW24 774 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 ASTN2O75129 1339 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-206ENST00000555232 ERLIN1O75477 346 aa13.46□□□□□ -0.26
ARHGEF40-206ENST00000555232 PEX3P56589 373 aa13.46□□□□□ -0.26
ARHGEF40-206ENST00000555232 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.26
ARHGEF40-206ENST00000555232 FAM198AQ9UFP1 575 aa13.46□□□□□ -0.26
ARHGEF40-206ENST00000555232 PNMA6AP0CW24 399 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 TNNI1P19237 187 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 CCNE1P24864 410 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 DNM2P50570 870 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 TMTC1Q8IUR5 882 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 U2AF1L4Q8WU68 220 aaKnown RBP13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 ZMYND12Q9H0C1 365 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 MLXIPQ9HAP2 919 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 HYOU1Q9Y4L1 999 aa13.45□□□□□ -0.26
ARHGEF40-206ENST00000555232 TRIM49P0CI25 452 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms