RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 G3BP2Q9UN86 482 aaKnown RBP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 ELL2O00472 640 aaPredicted RBP5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 NOP56O00567 594 aaKnown RBP5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 DLX3O60479 287 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 DNAJC8O75937 253 aaPredicted RBP5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 KCNH1O95259 989 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 SOX5P35711 763 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 SNW1Q13573 536 aaKnown RBP5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 AMOTQ4VCS5 1084 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 TRIM61Q5EBN2 209 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 CNNM4Q6P4Q7 775 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 LRRTM3Q86VH5 581 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 USHBP1Q8N6Y0 703 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 SLC7A14Q8TBB6 771 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 FBLIM1Q8WUP2 373 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 RNF141Q8WVD5 230 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 AKTIPQ9H8T0 292 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 TRIM39Q9HCM9 518 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 HOMER2Q9NSB8 354 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 SFMBT1Q9UHJ3 866 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 PCDHB12Q9Y5F1 795 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 ABCC4O15439 1325 aa5.84□□□□□ -1.47
PPP4R3A-204ENST00000554574 DNAJC25-GNG10A0A024R161 153 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 BLACEA4D250 179 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 ARHGEF15O94989 841 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 IGHDP01880 384 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 NFICP08651 508 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 USP11P51784 963 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 NBPF9Q3BBW0 867 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 PLEKHO1Q53GL0 409 aaPredicted RBP5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 CT47A1Q5JQC4 288 aaPredicted RBP5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 Q6ZS46 218 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 ITPRIPQ8IWB1 547 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 IL17REQ8NFR9 667 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 LRRC59Q96AG4 307 aaKnown RBP5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 ASPNQ9BXN1 380 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 CHMP4BQ9H444 224 aaKnown RBP5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 SLC52A2Q9HAB3 445 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 ENAMQ9NRM1 1142 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 MAGEC2Q9UBF1 373 aaPredicted RBP5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 TSPYL4Q9UJ04 414 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 FBXL21Q9UKT6 434 aa5.84□□□□□ -1.48
PPP4R3A-204ENST00000554574 ROBO1Q9Y6N7 1651 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 SART1O43290 800 aaKnown RBP5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 GAS2O43903 313 aaKnown RBP5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 LRRN2O75325 713 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 GLB1P16278 677 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 NFKB2Q00653 900 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 PPP2R5DQ14738 602 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 TAF7Q15545 349 aaPredicted RBP5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 SGO2Q562F6 1265 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 PRRT3Q5FWE3 981 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 GTF2IRD2BQ6EKJ0 949 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 POMZP3Q6PJE2 187 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 BRAPQ7Z569 592 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 GTF2IRD2Q86UP8 949 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 AFAP1L2Q8N4X5 818 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 TMEM57Q8N5G2 664 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 FBXL18Q96ME1 805 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 API5Q9BZZ5 524 aaKnown RBP5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 PRDM14Q9GZV8 571 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 NOL6Q9H6R4 1146 aaKnown RBP5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 PRDM10Q9NQV6 1147 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 ZBTB40Q9NUA8 1239 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 INTS7Q9NVH2 962 aaKnown RBP5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 NDOR1Q9UHB4 597 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 MAPRE3Q9UPY8 281 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 FHOD1Q9Y613 1164 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 SHANK3Q9BYB0 1731 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 COL22A1Q8NFW1 1626 aaPredicted RBP5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 RGS12O14924 1447 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 PTPRCP08575 1304 aa5.83□□□□□ -1.48
PPP4R3A-204ENST00000554574 ETV3P41162 512 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 CDK5R2Q13319 367 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 NTRK3Q16288 839 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 KRT24Q2M2I5 525 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 NOL9Q5SY16 702 aaKnown RBP5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 FGD2Q7Z6J4 655 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 FIBCD1Q8N539 461 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 UBL7Q96S82 380 aaPredicted RBP5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 RWDD1Q9H446 243 aaPredicted RBP5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 GFOD1Q9NXC2 390 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 CHPF2Q9P2E5 772 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 MKL2Q9ULH7 1088 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 AHDC1Q5TGY3 1603 aaPredicted RBP5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 LTBP4Q8N2S1 1624 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 CNTNAP4Q9C0A0 1308 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 A0A087WZG4 1122 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 WFS1O76024 890 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 GFRA1P56159 465 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 HDAC1Q13547 482 aaPredicted RBP5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 BRDTQ58F21 947 aaPredicted RBP5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 C1orf141Q5JVX7 400 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 ODR4Q5SWX8 454 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 ZNF530Q6P9A1 599 aaPredicted RBP5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 SEZ6L2Q6UXD5 910 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 STRA8Q7Z7C7 330 aa5.82□□□□□ -1.48
PPP4R3A-204ENST00000554574 CRACR2BQ8N4Y2 399 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms