RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 PMFBP1Q8TBY8 1022 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.24□□□□□ -1.25
ATXN3-225ENST00000554214 DDX11Q96FC9 970 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 IPO9Q96P70 1041 aaKnown RBP7.24□□□□□ -1.25
ATXN3-225ENST00000554214 NOX5Q96PH1 765 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 PARD6AQ9NPB6 346 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 TADA3O75528 432 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 INHBBP09529 407 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 FAM153BP0C7A2 387 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 CAP1Q01518 475 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 FAM209AQ5JX71 171 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 FOXB2Q5VYV0 432 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 TTLL10Q6ZVT0 673 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 DPH6Q7L8W6 267 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 IFNL3Q8IZI9 196 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 KCNC2Q96PR1 638 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 DEPDC7Q96QD5 511 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 ZFYVE21Q9BQ24 234 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 SYT3Q9BQG1 590 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 EPB41L1Q9H4G0 881 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 PPARGC1AQ9UBK2 798 aaKnown RBP7.23□□□□□ -1.25
ATXN3-225ENST00000554214 KDM2BQ8NHM5 1336 aa7.23□□□□□ -1.25
ATXN3-225ENST00000554214 TRBV23-1A0A0A0MS06 115 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 SASH1O94885 1247 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 C8BP07358 591 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 CYP2C8P10632 490 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 GPR85P60893 370 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 HTRA3P83110 453 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 STYK1Q6J9G0 422 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 MIB1Q86YT6 1006 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 ADGRG2Q8IZP9 1017 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 ZNF526Q8TF50 670 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-225ENST00000554214 SRPK1Q96SB4 655 aaKnown RBP7.22□□□□□ -1.25
ATXN3-225ENST00000554214 KCNJ15Q99712 375 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 YIPF4Q9BSR8 244 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 SNTG2Q9NY99 539 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 ZNF652Q9Y2D9 606 aa7.22□□□□□ -1.25
ATXN3-225ENST00000554214 SMARCA4P51532 1647 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 A0A1B0GTL3 188 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 TCRBV5S2A0A599 114 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 STAT5AP42229 794 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 RASA3Q14644 834 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 KIZQ2M2Z5 673 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 VWA3BQ502W6 1294 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 EMC4Q5J8M3 183 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 SAPCD2Q86UD0 394 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 ZC3H18Q86VM9 953 aaKnown RBP7.21□□□□□ -1.26
ATXN3-225ENST00000554214 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 ARRDC4Q8NCT1 418 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 MKL1Q969V6 931 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 ZBTB8AQ96BR9 441 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 DNAJC2Q99543 621 aaKnown RBP7.21□□□□□ -1.26
ATXN3-225ENST00000554214 DNAJC7Q99615 494 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 GORASP1Q9BQQ3 440 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 SMOC1Q9H4F8 434 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 PCDH18Q9HCL0 1135 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 SLC6A20Q9NP91 592 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 PCDHB4Q9Y5E5 795 aa7.21□□□□□ -1.26
ATXN3-225ENST00000554214 ASXL2Q76L83 1435 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 KRIT1O00522 736 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 COL6A2P12110 1019 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 HOXA5P20719 270 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 SMAD4Q13485 552 aaKnown RBP7.2□□□□□ -1.26
ATXN3-225ENST00000554214 STK32CQ86UX6 486 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 SREK1Q8WXA9 508 aaKnown RBP7.2□□□□□ -1.26
ATXN3-225ENST00000554214 DHRS4Q9BTZ2 278 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
ATXN3-225ENST00000554214 SPATA6Q9NWH7 488 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-225ENST00000554214 TRAF6Q9Y4K3 522 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 ADAMTS20P59510 1910 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 HMGXB3Q12766 1538 aa7.2□□□□□ -1.26
ATXN3-225ENST00000554214 BAZ1BQ9UIG0 1483 aaKnown RBP7.19□□□□□ -1.26
ATXN3-225ENST00000554214 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 MAFKO60675 156 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 SLURP1P55000 103 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 SUMO1P63165 101 aaKnown RBP7.19□□□□□ -1.26
ATXN3-225ENST00000554214 NKX3-2P78367 333 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 LONRF2Q1L5Z9 754 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 LINC00482Q8N8I6 264 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 SYT8Q8NBV8 401 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.19□□□□□ -1.26
ATXN3-225ENST00000554214 FEZF2Q8TBJ5 459 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 PTPRN2Q92932 1015 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 TOE1Q96GM8 510 aaKnown RBP7.19□□□□□ -1.26
ATXN3-225ENST00000554214 C11orf84Q9BUA3 381 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-225ENST00000554214 LUC7LQ9NQ29 371 aaKnown RBP7.19□□□□□ -1.26
ATXN3-225ENST00000554214 MYOTQ9UBF9 498 aa7.19□□□□□ -1.26
ATXN3-225ENST00000554214 BAZ1AQ9NRL2 1556 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-225ENST00000554214 SH3D21A4FU49 640 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 SMARCA5O60264 1052 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-225ENST00000554214 SOD2P04179 222 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 GRK2P25098 689 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 GRK3P35626 688 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 KCNC1P48547 511 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 DLX2Q07687 328 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-225ENST00000554214 SPIRE1Q08AE8 756 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 CR1LQ2VPA4 569 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 LIPIQ6XZB0 460 aa7.18□□□□□ -1.26
ATXN3-225ENST00000554214 TTLL7Q6ZT98 887 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms