RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 AFDNP55196 1824 aaKnown RBP4.42□□□□□ -1.7
SLIRP-202ENST00000553981 FLT4P35916 1363 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 CARMIL3Q8ND23 1372 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 TM4SF1P30408 202 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 SSPNQ14714 243 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 ZNF385BQ569K4 471 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 ADGRF1Q5T601 910 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 TCERG1LQ5VWI1 586 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 AEBP1Q8IUX7 1158 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 PHACTR4Q8IZ21 702 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 ENOX1Q8TC92 643 aaKnown RBP4.41□□□□□ -1.7
SLIRP-202ENST00000553981 RAPGEF4Q8WZA2 1011 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 KIF2CQ99661 725 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 ZNF831Q5JPB2 1677 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 CGNL1Q0VF96 1302 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 WASHC2AQ641Q2 1341 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 CCDC88AQ3V6T2 1871 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 NRXN2Q9P2S2 1712 aa4.41□□□□□ -1.7
SLIRP-202ENST00000553981 CEP350Q5VT06 3117 aa4.4□□□□□ -1.7
SLIRP-202ENST00000553981 OR14I1A6ND48 311 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 POLRMTO00411 1230 aaKnown RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 NRDCO43847 1150 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 TRIM13O60858 407 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 USP2O75604 605 aaPredicted RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 RPS6KA4O75676 772 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 RPL10P27635 214 aaKnown RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 GBP1P32455 592 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 TGFB2P61812 414 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 NMIQ13287 307 aaPredicted RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 SYTL5Q8TDW5 730 aaPredicted RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 SMARCC1Q92922 1105 aaPredicted RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 FAM161BQ96MY7 647 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 TMEM74Q96NL1 305 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 HDAC8Q9BY41 377 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 FOXP3Q9BZS1 431 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 ASCC2Q9H1I8 757 aaPredicted RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 MBD1Q9UIS9 605 aaPredicted RBP4.4□□□□□ -1.71
SLIRP-202ENST00000553981 ANKRD31Q8N7Z5 1873 aa4.4□□□□□ -1.71
SLIRP-202ENST00000553981 RFXAPO00287 272 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 RGS13O14921 159 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 FOXD2O60548 495 aaPredicted RBP4.39□□□□□ -1.71
SLIRP-202ENST00000553981 UBOX5O94941 541 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 HSPA1AP0DMV8 641 aaKnown RBP4.39□□□□□ -1.71
SLIRP-202ENST00000553981 HSPA1BP0DMV9 641 aaKnown RBP4.39□□□□□ -1.71
SLIRP-202ENST00000553981 PI3P19957 117 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 GBP2P32456 591 aaPredicted RBP4.39□□□□□ -1.71
SLIRP-202ENST00000553981 TMF1P82094 1093 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 FAM160A1Q05DH4 1040 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 MPP2Q14168 576 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 RNF111Q6ZNA4 994 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 CEP128Q6ZU80 1094 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 TMC4Q7Z404 712 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 REC114Q7Z4M0 266 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 RELL1Q8IUW5 271 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 TMEM151BQ8IW70 566 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 IFNL2Q8IZJ0 200 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 FBXO27Q8NI29 283 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 PANK1Q8TE04 598 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 TCTN2Q96GX1 697 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 MAP6Q96JE9 813 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 SIGLEC10Q96LC7 697 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 RSRP1Q9BUV0 290 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 TMOD3Q9NYL9 352 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 ZMYM5Q9UJ78 669 aa4.39□□□□□ -1.71
SLIRP-202ENST00000553981 USP42Q9H9J4 1324 aaKnown RBP4.39□□□□□ -1.71
SLIRP-202ENST00000553981 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
SLIRP-202ENST00000553981 DLEC1Q9Y238 1755 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 VIRMAQ69YN4 1812 aaKnown RBP4.38□□□□□ -1.71
SLIRP-202ENST00000553981 TMEM82A0PJX8 343 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 HRKO00198 91 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 PPM1GO15355 546 aaPredicted RBP4.38□□□□□ -1.71
SLIRP-202ENST00000553981 GARTP22102 1010 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 KIR2DL1P43626 348 aaPredicted RBP4.38□□□□□ -1.71
SLIRP-202ENST00000553981 KIR2DL2P43627 348 aaPredicted RBP4.38□□□□□ -1.71
SLIRP-202ENST00000553981 TNNT2P45379 298 aaPredicted RBP4.38□□□□□ -1.71
SLIRP-202ENST00000553981 CRKLP46109 303 aaKnown RBP4.38□□□□□ -1.71
SLIRP-202ENST00000553981 SLC39A6Q13433 755 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 SLC14A2Q15849 920 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 TMC3Q7Z5M5 1100 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 DNAJC10Q8IXB1 793 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 GOLM1Q8NBJ4 401 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 DAGLBQ8NCG7 672 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 CRELD1Q96HD1 420 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 HHIPL1Q96JK4 782 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 CRTAC1Q9NQ79 661 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 RNF181Q9P0P0 153 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 TCFL5Q9UL49 500 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 IRAK3Q9Y616 596 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 CACNA1SQ13698 1873 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 KIF24Q5T7B8 1368 aa4.38□□□□□ -1.71
SLIRP-202ENST00000553981 SCN11AQ9UI33 1791 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SLC22A31A6NKX4 558 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 MINDY4BA8MYZ0 360 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 PATL2C9JE40 543 aaKnown RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SDHBP21912 280 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 VIPR1P32241 457 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 EPHB3P54753 998 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 PCBP3P57721 371 aaKnown RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 CHMP4BP1P59074 171 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms