RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CDC42EP5Q6NZY7 148 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 ACAD11Q709F0 780 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 IQCA1Q86XH1 822 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 KRTAP1-3Q8IUG1 177 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 MAPKAPK5Q8IW41 473 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 FBXL16Q8N461 479 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 CCDC17Q96LX7 622 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 MXD3Q9BW11 206 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 CWC22Q9HCG8 908 aaKnown RBP5.87□□□□□ -1.47
VTI1B-202ENST00000553619 MYOZ2Q9NPC6 264 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 RNF181Q9P0P0 153 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 PI4KBQ9UBF8 816 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 PALD1Q9ULE6 856 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.87□□□□□ -1.47
VTI1B-202ENST00000553619 MYH1P12882 1939 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 SCN9AQ15858 1988 aa5.87□□□□□ -1.47
VTI1B-202ENST00000553619 CCDC69A6NI79 296 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 IFIT3O14879 490 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 DHX16O60231 1041 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 EPHA1P21709 976 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 CDC27P30260 824 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 CD68P34810 354 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 GMPSP49915 693 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 EXOSC10Q01780 885 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 DNM1Q05193 864 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 PICALMQ13492 652 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 PPP2R5BQ15173 497 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 ADCK5Q3MIX3 580 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 NOM1Q5C9Z4 860 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 C9orf131Q5VYM1 1079 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 Q6ZUG5 572 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 FAM83AQ86UY5 434 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 ZSCAN29Q8IWY8 852 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 ARMC10Q8N2F6 343 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 CRACR2BQ8N4Y2 399 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 FAM151AQ8WW52 585 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 ZNF274Q96GC6 653 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 PRMT6Q96LA8 375 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 TTC14Q96N46 770 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 UBAC1Q9BSL1 405 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 UPF3BQ9BZI7 483 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 OSBPL5Q9H0X9 879 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 TDRD3Q9H7E2 651 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 EPB41L4AQ9HCS5 686 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 PCMTD2Q9NV79 361 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 ZNF70Q9UC06 446 aaPredicted RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 RAXQ9Y2V3 346 aa5.86□□□□□ -1.47
VTI1B-202ENST00000553619 BAZ2AQ9UIF9 1905 aaKnown RBP5.86□□□□□ -1.47
VTI1B-202ENST00000553619 EP400Q96L91 3159 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 FLT1P17948 1338 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 IQCA1LA6NCM1 817 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 TSPY2A6NKD2 308 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 B4E1Z4 1266 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 WNT10BO00744 389 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 FOXP2O15409 715 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 PRC1O43663 620 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 RANBP6O60518 1105 aaKnown RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 WDHD1O75717 1129 aaPredicted RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 TSPY3P0CV98 308 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 TSPY8P0CW00 308 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 YBX3P16989 372 aaKnown RBP eCLIP5.85□□□□□ -1.475e-6■■■□□ 16.4
VTI1B-202ENST00000553619 PTPRAP18433 802 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 LIFRP42702 1097 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 CD97P48960 835 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 CDK8P49336 464 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 AK2P54819 239 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 WTAPQ15007 396 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 RRP12Q5JTH9 1297 aaKnown RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 CPLX2Q6PUV4 134 aaKnown RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 NFXL1Q6ZNB6 911 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 C16orf86Q6ZW13 317 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 UBASH3BQ8TF42 649 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 EDEM1Q92611 657 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 INTS4Q96HW7 963 aaKnown RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 ZBED3Q96IU2 234 aaPredicted RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 PBX4Q9BYU1 374 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 AGXT2Q9BYV1 514 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 EHD4Q9H223 541 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 SLKQ9H2G2 1235 aaPredicted RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 CABP5Q9NP86 173 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 ADARB2Q9NS39 739 aaKnown RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 TCP11L1Q9NUJ3 509 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 GPRC5DQ9NZD1 345 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 TMEM63CQ9P1W3 806 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 ZSWIM5Q9P217 1185 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 KANSL3Q9P2N6 904 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 SEPT3Q9UH03 358 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 HERC5Q9UII4 1024 aaKnown RBP5.85□□□□□ -1.47
VTI1B-202ENST00000553619 SERPINB13Q9UIV8 391 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 KIF3AQ9Y496 699 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 ECM29Q5VYK3 1845 aa5.85□□□□□ -1.47
VTI1B-202ENST00000553619 CCDC196A0A1B0GTZ2 297 aa5.84□□□□□ -1.47
VTI1B-202ENST00000553619 GLTPD2A6NH11 291 aa5.84□□□□□ -1.47
VTI1B-202ENST00000553619 TCP10L2B9ZVM9 353 aa5.84□□□□□ -1.47
VTI1B-202ENST00000553619 FSCN2O14926 492 aa5.84□□□□□ -1.47
VTI1B-202ENST00000553619 DDX3YO15523 660 aaKnown RBP5.84□□□□□ -1.47
VTI1B-202ENST00000553619 ADAM11O75078 769 aa5.84□□□□□ -1.47
VTI1B-202ENST00000553619 DDNO94850 711 aaPredicted RBP5.84□□□□□ -1.47
VTI1B-202ENST00000553619 TGFB1P01137 390 aa5.84□□□□□ -1.47
VTI1B-202ENST00000553619 IGLV1-40P01703 118 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms