RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 RBM20Q5T481 1227 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 NOA1Q8NC60 698 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 EHMT1Q9H9B1 1298 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 TRNAU1APQ9NX07 287 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 L1RE1Q9UN81 338 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 NFE2L3Q9Y4A8 694 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 GNAI3P08754 354 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 GSTA2P09210 222 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 SERPINB8P50452 374 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 BLMHQ13867 455 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 POSTNQ15063 836 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 LLGL1Q15334 1064 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 C3orf67Q6ZVT6 689 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 MICU3Q86XE3 530 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 NRDE2Q9H7Z3 1164 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 TRPV5Q9NQA5 729 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 C8orf4Q9NR00 106 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 DHX29Q7Z478 1369 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ESRRAP11474 423 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 EEF1DP29692 281 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 CDC37Q16543 378 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 TRIM16LQ309B1 348 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 CLEC17AQ6ZS10 378 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 RIBC1Q8N443 379 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 MRPL9Q9BYD2 267 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 PANK4Q9NVE7 773 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 FAM107AO95990 144 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 SLC16A2P36021 539 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 TUBA3EQ6PEY2 450 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 PPP1R14CQ8TAE6 165 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 GIPC3Q8TF64 312 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 PCDH12Q9NPG4 1184 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 KLHL42Q9P2K6 505 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 BCAP29Q9UHQ4 241 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 CCT8L1PA6NM43 557 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 AMPHP49418 695 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 PPP2R5CQ13362 524 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 THAP11Q96EK4 314 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 GLT8D2Q9H1C3 349 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 TMCC3Q9ULS5 477 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 MAGOHP61326 146 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 NAA20P61599 178 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 PLA2G4EQ3MJ16 856 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 ALS2CLQ60I27 953 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 SDE2Q6IQ49 451 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 KIF6Q6ZMV9 814 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 MAGOHBQ96A72 148 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 RSPH9Q9H1X1 276 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 ZBTB40Q9NUA8 1239 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 KRT9P35527 623 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 IST1P53990 364 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 RASSF7Q02833 373 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 TAF7Q15545 349 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 STK11Q15831 433 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 IFNLR1Q8IU57 520 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 SNX29Q8TEQ0 813 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 TXLNGQ9NUQ3 528 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 UCKL1Q9NWZ5 548 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 SNX14Q9Y5W7 946 aa9.74□□□□□ -0.85
GTF2A1-203ENST00000553612 NPHP3-ACAD11A0A0J9YXS1 232 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 TESPA1A2RU30 521 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 GOLGA8AA7E2F4 631 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 ATP8B2P98198 1209 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 TUBA3CQ13748 450 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 APLFQ8IW19 511 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 MMTAG2Q9BU76 263 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 DHX36Q9H2U1 1008 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 EMC3Q9P0I2 261 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 ARHGAP10A1A4S6 786 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 TFRCP02786 760 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 AMPD3Q01432 767 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 KRT24Q2M2I5 525 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 PDXDC1Q6P996 788 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 KRT12Q99456 494 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 NOL6Q9H6R4 1146 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 HOMER2Q9NSB8 354 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 CFAP69A5D8W1 941 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 TRIM64A6NGJ6 449 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 TRIM64BA6NI03 449 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 A8MUI8 341 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 MAGEB3O15480 346 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 C6orf118Q5T5N4 469 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 CDCA2Q69YH5 1023 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 RAVER1Q8IY67 606 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 FGD6Q6ZV73 1430 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 KRT8P05787 483 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 CHMLP26374 656 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 KIF23Q02241 960 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 KCTD19Q17RG1 926 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 BRAPQ7Z569 592 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 ARAP1Q96P48 1450 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 GOLGA8QA0A0J9YX86 632 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 CCDC166P0CW27 439 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 MTF1Q14872 753 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 LRRC14Q15048 493 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 WDR45BQ5MNZ6 344 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 SLC2A7Q6PXP3 512 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms