RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.35■□□□□ 0.21
LETMD1-235ENST00000552739 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
LETMD1-235ENST00000552739 LCTP09848 1927 aa16.35■□□□□ 0.21
LETMD1-235ENST00000552739 MYH6P13533 1939 aa16.35■□□□□ 0.21
LETMD1-235ENST00000552739 RPTORQ8N122 1335 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 A0A087WWV3 80 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 MMP1P03956 469 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 SLC16A2P36021 539 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 GJA8P48165 433 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 ETF1P62495 437 aaKnown RBP16.34■□□□□ 0.21
LETMD1-235ENST00000552739 SAFBQ15424 915 aaKnown RBP eCLIP16.34■□□□□ 0.21
LETMD1-235ENST00000552739 GPATCH4Q5T3I0 446 aaKnown RBP16.34■□□□□ 0.21
LETMD1-235ENST00000552739 IFIT1BQ5T764 474 aaKnown RBP16.34■□□□□ 0.21
LETMD1-235ENST00000552739 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 MLKLQ8NB16 471 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 ZNF592Q92610 1267 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 ERCC4Q92889 916 aaPredicted RBP16.34■□□□□ 0.21
LETMD1-235ENST00000552739 RANBP17Q9H2T7 1088 aaKnown RBP16.34■□□□□ 0.21
LETMD1-235ENST00000552739 KCNH3Q9ULD8 1083 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 SLC12A7Q9Y666 1083 aa16.34■□□□□ 0.21
LETMD1-235ENST00000552739 SMCHD1A6NHR9 2005 aa16.33■□□□□ 0.21
LETMD1-235ENST00000552739 UBASH3AP57075 661 aa16.33■□□□□ 0.21
LETMD1-235ENST00000552739 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.21
LETMD1-235ENST00000552739 CACNB2Q08289 660 aaPredicted RBP16.33■□□□□ 0.21
LETMD1-235ENST00000552739 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.21
LETMD1-235ENST00000552739 OLFML2BQ68BL8 750 aa16.33■□□□□ 0.21
LETMD1-235ENST00000552739 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.21
LETMD1-235ENST00000552739 HMX1Q9NP08 348 aaPredicted RBP16.33■□□□□ 0.21
LETMD1-235ENST00000552739 SLC5A4Q9NY91 659 aa16.33■□□□□ 0.21
LETMD1-235ENST00000552739 CEP131Q9UPN4 1083 aa16.33■□□□□ 0.21
LETMD1-235ENST00000552739 ARHGAP6O43182 974 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 ZSCAN12O43309 604 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 PPFIA3O75145 1194 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 H2AFXP16104 143 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-235ENST00000552739 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-235ENST00000552739 NFXL1Q6ZNB6 911 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 MICU3Q86XE3 530 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 CHST13Q8NET6 341 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.2
LETMD1-235ENST00000552739 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 TRMT1Q9NXH9 659 aaKnown RBP16.33■□□□□ 0.2
LETMD1-235ENST00000552739 FBXO40Q9UH90 709 aa16.33■□□□□ 0.2
LETMD1-235ENST00000552739 LRRC37A2A6NM11 1700 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 BIN1O00499 593 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 DEXIO95424 95 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 PGK2P07205 417 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 SARSP49591 514 aaKnown RBP16.32■□□□□ 0.2
LETMD1-235ENST00000552739 SNAP25P60880 206 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 TBX2Q13207 712 aaPredicted RBP16.32■□□□□ 0.2
LETMD1-235ENST00000552739 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 ASPRV1Q53RT3 343 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 CNNM3Q8NE01 707 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 ENOX1Q8TC92 643 aaKnown RBP16.32■□□□□ 0.2
LETMD1-235ENST00000552739 MAML3Q96JK9 1138 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 DEFB118Q96PH6 123 aa16.32■□□□□ 0.2
LETMD1-235ENST00000552739 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
LETMD1-235ENST00000552739 SGPL1O95470 568 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 ICAM1P05362 532 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 TPM1P09493 284 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 ZNF792Q3KQV3 632 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 KMT5BQ4FZB7 885 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 AIFM3Q96NN9 605 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 ARID3AQ99856 593 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 ACAD9Q9H845 621 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 HOMER2Q9NSB8 354 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 RNF146Q9NTX7 359 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
LETMD1-235ENST00000552739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.2
LETMD1-235ENST00000552739 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 ERICH2A1L162 156 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 BMP15O95972 392 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 SERPINC1P01008 464 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 ZNF18P17022 549 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 ERCC5P28715 1186 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-235ENST00000552739 CYP2C19P33261 490 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 PHKBQ93100 1093 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 FBXO2Q9UK22 296 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-235ENST00000552739 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 PCDHA5Q9Y5H7 936 aa16.31■□□□□ 0.2
LETMD1-235ENST00000552739 PARP1P09874 1014 aaKnown RBP16.3■□□□□ 0.2
LETMD1-235ENST00000552739 ALAS1P13196 640 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 CYBAP13498 195 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 CAPN2P17655 700 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 CCND3P30281 292 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-235ENST00000552739 PNOCQ13519 176 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 WTAPQ15007 396 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 RTN1Q16799 776 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 LONRF3Q496Y0 759 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 SENP2Q9HC62 589 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 DNAI1Q9UI46 699 aa16.3■□□□□ 0.2
LETMD1-235ENST00000552739 SRPRBQ9Y5M8 271 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms