RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 AGBL1Q96MI9 1066 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 GFPT1Q06210 699 aaPredicted RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 CDR2LQ86X02 465 aaPredicted RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ARHGAP23Q9P227 1491 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ACTN1P12814 892 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 SMAD1Q15797 465 aaKnown RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 C8orf74Q6P047 294 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 NEDD1Q8NHV4 660 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 ENOX1Q8TC92 643 aaKnown RBP11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 POMGNT1Q8WZA1 660 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 SELENOSQ9BQE4 189 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 PTPN22Q9Y2R2 807 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 DLG5Q8TDM6 1919 aa11.87□□□□□ -0.51
TGFBR1-209ENST00000552516 C3P01024 1663 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 SYNJ2BP-COX16A0A087WUM0 186 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 ZC2HC1CQ53FD0 456 aaPredicted RBP11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 CEP112Q8N8E3 955 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 COX16Q9P0S2 106 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 CSADQ9Y600 493 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 A0A0U1RQJ8 604 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 ESYT3A0FGR9 886 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 ADAMTS3O15072 1205 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 IFRD2Q12894 506 aaPredicted RBP11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 MTMR2Q13614 643 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 FBXO38Q6PIJ6 1188 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 CEP170P1Q96L14 293 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 PLCD4Q9BRC7 762 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 PXDNLA1KZ92 1463 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 TMEM150BA6NC51 233 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 ZBTB39O15060 712 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 DNM2P50570 870 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 GRIPAP1Q4V328 841 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 SCARA5Q6ZMJ2 495 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 SAAL1Q96ER3 474 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 CD58P19256 250 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 PPP2R5DQ14738 602 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 AP1M1Q9BXS5 423 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
TGFBR1-209ENST00000552516 CNGA1P29973 690 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 SMTNP53814 917 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PKN1Q16512 942 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 MAP9Q49MG5 647 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PIK3C2AO00443 1686 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 ZNF185O15231 689 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 FOXP2O15409 715 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 CALUO43852 315 aaPredicted RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PEX10O60683 326 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 TMOD1P28289 359 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 OAS2P29728 719 aaKnown RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PTPAQ15257 358 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 EXOC3L4Q17RC7 722 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 FAM47CQ5HY64 1035 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 KAZNQ674X7 775 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 DLK2Q6UY11 383 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PODNQ7Z5L7 613 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 SP8Q8IXZ3 490 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 CCDC17Q96LX7 622 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 KIFC3Q9BVG8 833 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 NT5C3AQ9H0P0 336 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PIM2Q9P1W9 311 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 UAP1Q16222 522 aaPredicted RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PEX26Q7Z412 305 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 IMPG2Q9BZV3 1241 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 NDST4Q9H3R1 872 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 PURBQ96QR8 312 aaKnown RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 RMDN3Q96TC7 470 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 NHEJ1Q9H9Q4 299 aaPredicted RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 MYO6Q9UM54 1294 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 RSPH10B2B2RC85 870 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 STXBP3O00186 592 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 RSPH10BP0C881 870 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 GCLMP48507 274 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 MESDQ14696 234 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 NOX5Q96PH1 765 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 TEKT3Q9BXF9 490 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 DDX41Q9UJV9 622 aaKnown RBP11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 SLIT1O75093 1534 aa11.85□□□□□ -0.51
TGFBR1-209ENST00000552516 IKBKBO14920 756 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 SLC16A4O15374 487 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 PLEKP08567 350 aaPredicted RBP11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 ATP2C1P98194 919 aaPredicted RBP11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 TXLNBQ8N3L3 684 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 NUDT12Q9BQG2 462 aa11.84□□□□□ -0.51
TGFBR1-209ENST00000552516 CYTH3O43739 400 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms