RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 APPP05067 770 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 LINC00271P0C7V0 271 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 MFSD10Q14728 455 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 KIAA0753Q2KHM9 967 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 PLEKHG4Q58EX7 1191 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 ZSCAN25Q6NSZ9 544 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 SEPT14Q6ZU15 432 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 TOP1MTQ969P6 601 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 INCENPQ9NQS7 918 aa17.08■□□□□ 0.32
VPS29-209ENST00000551655 FAM186AA6NE01 2351 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 FRMPD2Q68DX3 1309 aaPredicted RBP17.07■□□□□ 0.32
VPS29-209ENST00000551655 M0R2C6 588 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 GPAA1O43292 621 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 NCK2O43639 380 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 GH1P01241 217 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 CASTP20810 708 aaKnown RBP17.07■□□□□ 0.32
VPS29-209ENST00000551655 THPOP40225 353 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 NDUFV1P49821 464 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 SIGLEC14Q08ET2 396 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 MSLNLQ96KJ4 702 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 IFIH1Q9BYX4 1025 aaKnown RBP17.07■□□□□ 0.32
VPS29-209ENST00000551655 ZNF287Q9HBT7 754 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 IL17RBQ9NRM6 502 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 KIAA1217Q5T5P2 1943 aa17.07■□□□□ 0.32
VPS29-209ENST00000551655 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 SORBS3O60504 671 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 KDM4AO75164 1064 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
VPS29-209ENST00000551655 ADAM15Q13444 863 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 ERMP1Q7Z2K6 904 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 ADGRD2Q7Z7M1 963 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 CLEC1BQ9P126 229 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 TRPC6Q9Y210 931 aa17.06■□□□□ 0.32
VPS29-209ENST00000551655 DMXL1Q9Y485 3027 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 EMSYQ7Z589 1322 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 PROB1E7EW31 1015 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 HAS3O00219 553 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 ID4P47928 161 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 DGKDQ16760 1214 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 DHX37Q8IY37 1157 aaKnown RBP17.05■□□□□ 0.32
VPS29-209ENST00000551655 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 FIBCD1Q8N539 461 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 MYH7BA7E2Y1 1941 aa17.05■□□□□ 0.32
VPS29-209ENST00000551655 C5orf67F2Z3F1 127 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 EYA4O95677 639 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 F2P00734 622 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 CTSHP09668 335 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 CAMK1Q14012 370 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 CBX2Q14781 532 aaPredicted RBP17.04■□□□□ 0.32
VPS29-209ENST00000551655 SIRT2Q8IXJ6 389 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 DNERQ8NFT8 737 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 APPBP2Q92624 585 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 RPGRIP1Q96KN7 1286 aa17.04■□□□□ 0.32
VPS29-209ENST00000551655 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
VPS29-209ENST00000551655 KIAA1671Q9BY89 1806 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 KRT37O76014 449 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 BMPR1AP36894 532 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 BTNL9Q6UXG8 535 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 SERINC5Q86VE9 423 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 SMRP1Q8NCR6 262 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 SEPT8Q92599 483 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 TBC1D5Q92609 795 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 C11orf84Q9BUA3 381 aaPredicted RBP17.03■□□□□ 0.32
VPS29-209ENST00000551655 LMAN2LQ9H0V9 348 aa17.03■□□□□ 0.32
VPS29-209ENST00000551655 BARX2Q9UMQ3 279 aaPredicted RBP17.03■□□□□ 0.32
VPS29-209ENST00000551655 USP15Q9Y4E8 981 aaPredicted RBP17.03■□□□□ 0.32
VPS29-209ENST00000551655 GVINP1Q7Z2Y8 2422 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 TSPY2A6NKD2 308 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 DNAJB1P25685 340 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 CTDSPL2Q05D32 466 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 PPARAQ07869 468 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 DCAF4Q8WV16 495 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 TAAR1Q96RJ0 339 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
VPS29-209ENST00000551655 KATNAL1Q9BW62 490 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 IRF2BPLQ9H1B7 796 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 COL20A1Q9P218 1284 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 PCDHGC5Q9Y5F6 944 aa17.02■□□□□ 0.32
VPS29-209ENST00000551655 MED19A0JLT2 244 aaPredicted RBP17.01■□□□□ 0.31
VPS29-209ENST00000551655 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
VPS29-209ENST00000551655 GALR2O43603 387 aaPredicted RBP17.01■□□□□ 0.31
VPS29-209ENST00000551655 GLP2RO95838 553 aa17.01■□□□□ 0.31
VPS29-209ENST00000551655 MMP1P03956 469 aa17.01■□□□□ 0.31
VPS29-209ENST00000551655 RBM10P98175 930 aaKnown RBP17.01■□□□□ 0.31
VPS29-209ENST00000551655 USH1GQ495M9 461 aa17.01■□□□□ 0.31
VPS29-209ENST00000551655 PANK1Q8TE04 598 aa17.01■□□□□ 0.31
VPS29-209ENST00000551655 DDX41Q9UJV9 622 aaKnown RBP17.01■□□□□ 0.31
VPS29-209ENST00000551655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
VPS29-209ENST00000551655 DNAH14Q0VDD8 3507 aa17.01■□□□□ 0.31
VPS29-209ENST00000551655 ADGRA3Q8IWK6 1321 aa17■□□□□ 0.31
VPS29-209ENST00000551655 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
VPS29-209ENST00000551655 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
VPS29-209ENST00000551655 RB1P06400 928 aa17■□□□□ 0.31
VPS29-209ENST00000551655 NBL1P41271 181 aa17■□□□□ 0.31
VPS29-209ENST00000551655 CACNA1BQ00975 2339 aa17■□□□□ 0.31
VPS29-209ENST00000551655 TSHZ3Q63HK5 1081 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms