RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 SEC63Q9UGP8 760 aaKnown RBP16.57■□□□□ 0.24
PDE1B-207ENST00000550620 STX8Q9UNK0 236 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 COL4A1P02462 1669 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 USP17L3A6NCW0 530 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 USP17L4A6NCW7 530 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 FAM153BP0C7A2 387 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 TXKP42681 527 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDE1B-207ENST00000550620 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
PDE1B-207ENST00000550620 SLC4A8Q2Y0W8 1093 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 FAM153CQ494X1 144 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 ERFEQ4G0M1 354 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 NAA35Q5VZE5 725 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 USP17L1Q7RTZ2 530 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 CABS1Q96KC9 395 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 KRT12Q99456 494 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 TMEM47Q9BQJ4 181 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 FAM153AQ9UHL3 310 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 PCDHGC5Q9Y5F6 944 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 COL4A3BPQ9Y5P4 624 aa16.57■□□□□ 0.24
PDE1B-207ENST00000550620 CES2O00748 559 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 MDH1P40925 334 aaKnown RBP16.56■□□□□ 0.24
PDE1B-207ENST00000550620 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
PDE1B-207ENST00000550620 CALCRLQ16602 461 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 PTGISQ16647 500 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 MEI1Q5TIA1 1274 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 LRIG3Q6UXM1 1119 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 DYMQ7RTS9 669 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 ZNF473Q8WTR7 871 aaKnown RBP16.56■□□□□ 0.24
PDE1B-207ENST00000550620 TAF4BQ92750 862 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 DYNLL2Q96FJ2 89 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
PDE1B-207ENST00000550620 ESYT3A0FGR9 886 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 GNA14O95837 355 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 GUCY2FP51841 1108 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 GUCY1A3Q02108 690 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 KCNMA1Q12791 1236 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 SLC18A3Q16572 532 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 CCDC40Q4G0X9 1142 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 FAM83BQ5T0W9 1011 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 KCNV1Q6PIU1 500 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 REXO1Q8N1G1 1221 aaKnown RBP16.55■□□□□ 0.24
PDE1B-207ENST00000550620 CASKIN2Q8WXE0 1202 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 PIK3R5Q8WYR1 880 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 RAD54LQ92698 747 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 NLRC4Q9NPP4 1024 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 ESYT2A0FGR8 921 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 FTCDO95954 541 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 HSPA9P38646 679 aaKnown RBP16.55■□□□□ 0.24
PDE1B-207ENST00000550620 FNTAP49354 379 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 SEPT2Q15019 361 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 KRT79Q5XKE5 535 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 MAATS1Q7Z4T9 603 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 MYOCDQ8IZQ8 938 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 CELF1Q92879 486 aaKnown RBP16.55■□□□□ 0.24
PDE1B-207ENST00000550620 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 MTMR9Q96QG7 549 aa16.55■□□□□ 0.24
PDE1B-207ENST00000550620 BAZ2BQ9UIF8 2168 aaKnown RBP16.55■□□□□ 0.24
PDE1B-207ENST00000550620 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 hCG_1984214I3L0E3 225 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 KLRK1P26718 216 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 SIK1P57059 783 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 PLCB4Q15147 1175 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 PPP4R3AQ6IN85 833 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 C3orf67Q6ZVT6 689 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 NLRP14Q86W24 1093 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 GPIHBP1Q8IV16 184 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 ZNF713Q8N859 430 aaPredicted RBP16.54■□□□□ 0.24
PDE1B-207ENST00000550620 USP38Q8NB14 1042 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 CEP63Q96MT8 703 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 INPP4AQ96PE3 977 aaPredicted RBP16.54■□□□□ 0.24
PDE1B-207ENST00000550620 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
PDE1B-207ENST00000550620 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
PDE1B-207ENST00000550620 TFCP2L1Q9NZI6 479 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 ZSCAN5CA6NGD5 496 aaPredicted RBP16.54■□□□□ 0.24
PDE1B-207ENST00000550620 FAM107AO95990 144 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 KLRC1P26715 233 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 EHHADHQ08426 723 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 DRP2Q13474 957 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 CUL1Q13616 776 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 PDIA5Q14554 519 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 TMC4Q7Z404 712 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 MYCBPAPQ8TBZ2 947 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 DDX12PQ92771 950 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 ISCUQ9H1K1 167 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 PLCB1Q9NQ66 1216 aa16.54■□□□□ 0.24
PDE1B-207ENST00000550620 MYH1P12882 1939 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 GCOM1H8Y6P7 765 aaPredicted RBP16.53■□□□□ 0.24
PDE1B-207ENST00000550620 BAG3O95817 575 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 MYZAPP0CAP1 466 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 DNA2P51530 1060 aa16.53■□□□□ 0.24
PDE1B-207ENST00000550620 POLR2FP61218 127 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms