RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ZNF662Q6ZS27 426 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 CABP7Q86V35 215 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
VDR-208ENST00000550325 UIMC1Q96RL1 719 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 PSMD1Q99460 953 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 NBPF9Q3BBW0 867 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 SRBD1Q8N5C6 995 aaKnown RBP13.29□□□□□ -0.28
VDR-208ENST00000550325 NEUROG2Q9H2A3 272 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 PLCB1Q9NQ66 1216 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 PANK4Q9NVE7 773 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 TBC1D7Q9P0N9 293 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
VDR-208ENST00000550325 PDE8BO95263 885 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 BCAMP50895 628 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 LETM2Q2VYF4 491 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 GNPTABQ3T906 1256 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 NAALADL2Q58DX5 795 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 KSR1Q8IVT5 923 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 FAM133AQ8N9E0 248 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 AGAP11Q8TF27 550 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 AFDNP55196 1824 aaKnown RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 TCRBV5S4A2TA0A5A2 114 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 CHN1P15882 459 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 HSPA9P38646 679 aaKnown RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 UAP1Q16222 522 aaPredicted RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 THEMIS2Q5TEJ8 643 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 TATDN2Q93075 761 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 SART1O43290 800 aaKnown RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 TECP42680 631 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 KLHL30Q0D2K2 578 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 BIRC3Q13489 604 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 BZW1Q7L1Q6 419 aaKnown RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 DAAM2Q86T65 1068 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 CCDC84Q86UT8 332 aaPredicted RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 CD302Q8IX05 232 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 STAG2Q8N3U4 1231 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 XPO6Q96QU8 1125 aaKnown RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 PAGR1Q9BTK6 254 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 ZHX3Q9H4I2 956 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 LRRC4CQ9HCJ2 640 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 MLXIPLQ9NP71 852 aa13.28□□□□□ -0.28
VDR-208ENST00000550325 NOP53Q9NZM5 478 aaKnown RBP13.28□□□□□ -0.28
VDR-208ENST00000550325 RHOBTB3O94955 611 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 TNFRSF8P28908 595 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 XRCC4Q13426 336 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 FAM43BQ6ZT52 329 aaPredicted RBP13.27□□□□□ -0.28
VDR-208ENST00000550325 USP38Q8NB14 1042 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 CCT6BQ92526 530 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 ERGIC2Q96RQ1 377 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 SLC12A6Q9UHW9 1150 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 C15orf41Q9Y2V0 281 aa13.27□□□□□ -0.28
VDR-208ENST00000550325 KLRC4O43908 158 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 KCNJ2P63252 427 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 CCDC38Q502W7 563 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 SPICE1Q8N0Z3 855 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 ZNF483Q8TF39 744 aaPredicted RBP13.27□□□□□ -0.29
VDR-208ENST00000550325 HOOK2Q96ED9 719 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 A8MUI8 341 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 TTI1O43156 1089 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 MGRN1O60291 552 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 SLC5A1P13866 664 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 SNX1Q13596 522 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 LRRC14Q15048 493 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 ALX1Q15699 326 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 PRMT1Q99873 361 aaKnown RBP13.27□□□□□ -0.29
VDR-208ENST00000550325 SPATA31A3Q5VYP0 1347 aa13.27□□□□□ -0.29
VDR-208ENST00000550325 TRAF5O00463 557 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 IRS4O14654 1257 aaPredicted RBP13.26□□□□□ -0.29
VDR-208ENST00000550325 EVI5O60447 810 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 CAND2O75155 1236 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 RTN2O75298 545 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 ITGA4P13612 1032 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 COPB2P35606 906 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 TLDC1Q6P9B6 456 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 TRIM51Q9BSJ1 452 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 ISCUQ9H1K1 167 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 INTS9Q9NV88 658 aaKnown RBP13.26□□□□□ -0.29
VDR-208ENST00000550325 RBM28Q9NW13 759 aaKnown RBP13.26□□□□□ -0.29
VDR-208ENST00000550325 RNF14Q9UBS8 474 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
VDR-208ENST00000550325 ORC4O43929 436 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 DRD4P21917 467 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 KLHL29Q96CT2 875 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 SEMA6BQ9H3T3 888 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 KIF3CO14782 793 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 CCNT1O60563 726 aaKnown RBP13.26□□□□□ -0.29
VDR-208ENST00000550325 BYSLQ13895 437 aaKnown RBP13.26□□□□□ -0.29
VDR-208ENST00000550325 MAN2A1Q16706 1144 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 SOGA3Q5TF21 947 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 PDXDC1Q6P996 788 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms