RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 NAT16Q8N8M0 369 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 SH3RF3Q8TEJ3 882 aaPredicted RBP5.91□□□□□ -1.46
SNRPF-202ENST00000549580 SSBP3Q9BWW4 388 aaPredicted RBP5.91□□□□□ -1.46
SNRPF-202ENST00000549580 SLC12A9Q9BXP2 914 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 SPATA6Q9NWH7 488 aaPredicted RBP5.91□□□□□ -1.46
SNRPF-202ENST00000549580 PCDHB12Q9Y5F1 795 aa5.91□□□□□ -1.46
SNRPF-202ENST00000549580 A0A1W2PQJ5 194 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 SHOXO15266 292 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 PLATP00750 562 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 ITGAVP06756 1048 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 HSP90AA2PQ14568 343 aaPredicted RBP5.9□□□□□ -1.46
SNRPF-202ENST00000549580 TM4SF20Q53R12 229 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 KRT26Q7Z3Y9 468 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 ZNF761Q86XN6 746 aaPredicted RBP5.9□□□□□ -1.46
SNRPF-202ENST00000549580 CCDC144CPQ8IYA2 1237 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 NINJ1Q92982 152 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 EXOC2Q96KP1 924 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 DHRS4Q9BTZ2 278 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 APEX2Q9UBZ4 518 aa5.9□□□□□ -1.46
SNRPF-202ENST00000549580 TRAV20A0A0B4J274 112 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 FGFR1P11362 822 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 NCAM1P13591 858 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 PMLP29590 882 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 AUHQ13825 339 aaKnown RBP5.89□□□□□ -1.47
SNRPF-202ENST00000549580 TBC1D10BQ4KMP7 808 aaPredicted RBP5.89□□□□□ -1.47
SNRPF-202ENST00000549580 FAM209AQ5JX71 171 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 DCAF15Q66K64 600 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 ZNF227Q86WZ6 799 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 SCUBE1Q8IWY4 988 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 SYT3Q9BQG1 590 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 AARSD1Q9BTE6 412 aaKnown RBP5.89□□□□□ -1.47
SNRPF-202ENST00000549580 ZNF747Q9BV97 191 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 NCOA5Q9HCD5 579 aaKnown RBP5.89□□□□□ -1.47
SNRPF-202ENST00000549580 PDLIM7Q9NR12 457 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 FAM86C1Q9NVL1 165 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 ST6GALNAC2Q9UJ37 374 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 DBR1Q9UK59 544 aaKnown RBP5.89□□□□□ -1.47
SNRPF-202ENST00000549580 MRPS23Q9Y3D9 190 aaKnown RBP5.89□□□□□ -1.47
SNRPF-202ENST00000549580 ZNF451Q9Y4E5 1061 aa5.89□□□□□ -1.47
SNRPF-202ENST00000549580 A0A087WZG4 1122 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 TRBV23-1A0A0A0MS06 115 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 H0Y8X5 98 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 PLD2O14939 933 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 ENDOUP21128 410 aaKnown RBP5.88□□□□□ -1.47
SNRPF-202ENST00000549580 L1CAMP32004 1257 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 SARSP49591 514 aaKnown RBP5.88□□□□□ -1.47
SNRPF-202ENST00000549580 PPP2R2AP63151 447 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 PABPC4Q13310 644 aaKnown RBP eCLIP5.88□□□□□ -1.47
SNRPF-202ENST00000549580 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 YOD1Q5VVQ6 348 aaPredicted RBP5.88□□□□□ -1.47
SNRPF-202ENST00000549580 HLA-DQA1Q5Y7H0 255 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 B3GNT8Q7Z7M8 397 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 NIM1KQ8IY84 436 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 C7orf61Q8IZ16 206 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 ALG3Q92685 438 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 MFSD3Q96ES6 412 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 RCC1LQ96I51 464 aaKnown RBP5.88□□□□□ -1.47
SNRPF-202ENST00000549580 MRGPRX3Q96LB0 322 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 FGD4Q96M96 766 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 WHRNQ9P202 907 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 TSC22D4Q9Y3Q8 395 aa5.88□□□□□ -1.47
SNRPF-202ENST00000549580 PPM1BO75688 479 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 CD247P20963 164 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 SMAD4Q13485 552 aaKnown RBP5.87□□□□□ -1.47
SNRPF-202ENST00000549580 FNDC3BQ53EP0 1204 aaKnown RBP5.87□□□□□ -1.47
SNRPF-202ENST00000549580 THNSL2Q86YJ6 484 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 ARHGEF39Q8N4T4 335 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 BVESQ8NE79 360 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 SMARCC2Q8TAQ2 1214 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 OSBP2Q969R2 916 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 DSCC1Q9BVC3 393 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 MRPL4Q9BYD3 311 aaKnown RBP5.87□□□□□ -1.47
SNRPF-202ENST00000549580 RNF38Q9H0F5 515 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 METTL14Q9HCE5 456 aaKnown RBP5.87□□□□□ -1.47
SNRPF-202ENST00000549580 GP6Q9HCN6 339 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 LRP2BPQ9P2M1 347 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 FBLN5Q9UBX5 448 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 EMC9Q9Y3B6 208 aa5.87□□□□□ -1.47
SNRPF-202ENST00000549580 A0A087X0B3 334 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 KCNQ2O43526 872 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 GSNP06396 782 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 PABPC1P11940 636 aaKnown RBP5.86□□□□□ -1.47
SNRPF-202ENST00000549580 KLF10Q13118 480 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 USP51Q70EK9 711 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 LIMS2Q7Z4I7 341 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 DHX37Q8IY37 1157 aaKnown RBP5.86□□□□□ -1.47
SNRPF-202ENST00000549580 STAG1Q8WVM7 1258 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 BRF1Q92994 677 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 CLUHP3Q96NS8 147 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 CDC6Q99741 560 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 PRR13Q9NZ81 148 aa5.86□□□□□ -1.47
SNRPF-202ENST00000549580 NOP56O00567 594 aaKnown RBP5.85□□□□□ -1.47
SNRPF-202ENST00000549580 FGF10O15520 208 aaPredicted RBP5.85□□□□□ -1.47
SNRPF-202ENST00000549580 PRODHO43272 600 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 TBX1O43435 398 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 RAPGEF3O95398 923 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 POU3F3P20264 500 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms