RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CAPN11Q9UMQ6 739 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 PSMD10O75832 226 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 FGFR1OPO95684 399 aaKnown RBP11.15□□□□□ -0.62
RAB5B-206ENST00000549505 ECE1P42892 770 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 SETQ01105 290 aaPredicted RBP11.15□□□□□ -0.62
RAB5B-206ENST00000549505 PDE4DQ08499 809 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 MIIPQ5JXC2 388 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 PPP4R3CPQ6ZMV5 832 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 ANKRD7Q92527 254 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 STAMQ92783 540 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 CEP63Q96MT8 703 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 KCND2Q9NZV8 630 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 MTMR7Q9Y216 660 aa11.15□□□□□ -0.62
RAB5B-206ENST00000549505 UQCRHLA0A096LP55 91 aa11.15□□□□□ -0.63
RAB5B-206ENST00000549505 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.15□□□□□ -0.63
RAB5B-206ENST00000549505 FAM86B1E9PN63 330 aa11.15□□□□□ -0.63
RAB5B-206ENST00000549505 UQCRHP07919 91 aa11.15□□□□□ -0.63
RAB5B-206ENST00000549505 FAM86B2P0C5J1 330 aa11.15□□□□□ -0.63
RAB5B-206ENST00000549505 TPD52L1Q16890 204 aaPredicted RBP11.15□□□□□ -0.63
RAB5B-206ENST00000549505 ANKRD40Q6AI12 368 aa11.15□□□□□ -0.63
RAB5B-206ENST00000549505 MTERF4Q7Z6M4 381 aaKnown RBP11.15□□□□□ -0.63
RAB5B-206ENST00000549505 HSD17B14Q9BPX1 270 aa11.15□□□□□ -0.63
RAB5B-206ENST00000549505 TMEM39BQ9GZU3 492 aa11.15□□□□□ -0.63
RAB5B-206ENST00000549505 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.63
RAB5B-206ENST00000549505 POTEMA6NI47 508 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 MEIS1O00470 390 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 MCM6Q14566 821 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 ERMNQ8TAM6 284 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 NEK9Q8TD19 979 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 DDX12PQ92771 950 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
RAB5B-206ENST00000549505 VGLL3A8MV65 326 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 ATP2A1O14983 1001 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 MSH4O15457 936 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 CYP11B2P19099 503 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 PRELPP51888 382 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 OAZ1P54368 228 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 ASIC1P78348 528 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 RBL2Q08999 1139 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 EDRF1Q3B7T1 1238 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 TMTC1Q8IUR5 882 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 CLEC4DQ8WXI8 215 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 JDP2Q8WYK2 163 aa11.14□□□□□ -0.63
RAB5B-206ENST00000549505 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
RAB5B-206ENST00000549505 CLRN2A0PK11 232 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 RASSF10A6NK89 507 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 SPDYE3A6NKU9 549 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
RAB5B-206ENST00000549505 POLR2MP0CAP2 368 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 ETF1P62495 437 aaKnown RBP11.13□□□□□ -0.63
RAB5B-206ENST00000549505 NBPF9Q3BBW0 867 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 ARSHQ5FYA8 562 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 FAM83BQ5T0W9 1011 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 XRRA1Q6P2D8 792 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 RIT2Q99578 217 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 PPP2R2CQ9Y2T4 447 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 UBE4BO95155 1302 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 MYPNQ86TC9 1320 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 LYPLA2O95372 231 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 KCNN1Q92952 543 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 MAP7D2Q96T17 732 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 KCTD10Q9H3F6 313 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 SSC5DA1L4H1 1573 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
RAB5B-206ENST00000549505 MED24O75448 989 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 GNA14O95837 355 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 PLA2G4BP0C869 781 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 STX17P56962 302 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 COASYQ13057 564 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
RAB5B-206ENST00000549505 ABHD10Q9NUJ1 306 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 TRAF3IP3Q9Y228 551 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 SBF1O95248 1867 aa11.13□□□□□ -0.63
RAB5B-206ENST00000549505 ATP8B3O60423 1300 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 KIF20AO95235 890 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 EYA4O95677 639 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 ZNF131P52739 623 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 USP14P54578 494 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 RASA3Q14644 834 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 KLHL10Q6JEL2 608 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 PPFIBP1Q86W92 1011 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 CATSPER3Q86XQ3 398 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 KIF18AQ8NI77 898 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 CDK5RAP3Q96JB5 506 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 SRRTQ9BXP5 876 aaKnown RBP11.12□□□□□ -0.63
RAB5B-206ENST00000549505 OLFML3Q9NRN5 406 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 MYO1AQ9UBC5 1043 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 ADGRG1Q9Y653 693 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 FCER1AP12319 257 aa11.12□□□□□ -0.63
RAB5B-206ENST00000549505 CCT6AP40227 531 aaKnown RBP11.12□□□□□ -0.63
RAB5B-206ENST00000549505 FXR1P51114 621 aaKnown RBP eCLIP11.12□□□□□ -0.63
RAB5B-206ENST00000549505 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.12□□□□□ -0.63
RAB5B-206ENST00000549505 KRT26Q7Z3Y9 468 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms