RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
BEST3-209ENST00000548658 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 SPATA31C2B4DYI2 1134 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 MEIS2O14770 477 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 FIBPO43427 364 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 PARNO95453 639 aaKnown RBP13.1□□□□□ -0.31
BEST3-209ENST00000548658 GGPS1O95749 300 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 ACRP10323 421 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 CYP2C9P11712 490 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 HOXD8P13378 290 aaPredicted RBP13.1□□□□□ -0.31
BEST3-209ENST00000548658 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 PTGISQ16647 500 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 USP17L6PQ6QN14 398 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 NLRX1Q86UT6 975 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
BEST3-209ENST00000548658 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
BEST3-209ENST00000548658 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 CDHR1Q96JP9 859 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 INPP4AQ96PE3 977 aaPredicted RBP13.1□□□□□ -0.31
BEST3-209ENST00000548658 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 LAMA2P24043 3122 aaKnown RBP13.1□□□□□ -0.31
BEST3-209ENST00000548658 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
BEST3-209ENST00000548658 SPDYE3A6NKU9 549 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 hCG_1984214I3L0E3 225 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 NOP56O00567 594 aaKnown RBP13.09□□□□□ -0.31
BEST3-209ENST00000548658 MAFGO15525 162 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 F2P00734 622 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 ACTN1P12814 892 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
BEST3-209ENST00000548658 PSMA5P28066 241 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 HSPA4P34932 840 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
BEST3-209ENST00000548658 MFSD10Q14728 455 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 RTN1Q16799 776 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 KIAA0753Q2KHM9 967 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 METTL7BQ6UX53 244 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 ZNF713Q8N859 430 aaPredicted RBP13.09□□□□□ -0.31
BEST3-209ENST00000548658 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 KAT2BQ92831 832 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 KCNB2Q92953 911 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 FAM161BQ96MY7 647 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 USP26Q9BXU7 913 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 EHMT1Q9H9B1 1298 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
BEST3-209ENST00000548658 HAS3O00219 553 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 IQCF3P0C7M6 154 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 DNAJB2P25686 324 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 PSEN2P49810 448 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 SP2Q02086 613 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.32
BEST3-209ENST00000548658 RAB30Q15771 203 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 ERICH6BQ5W0A0 696 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 BLOC1S2Q6QNY1 142 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 FBXL16Q8N461 479 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 SLC17A8Q8NDX2 589 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 AFAP1L1Q8TED9 768 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 TIFAQ96CG3 184 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 SCLYQ96I15 445 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 GUCD1Q96NT3 240 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 MSRAQ9UJ68 235 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
BEST3-209ENST00000548658 MYH7BA7E2Y1 1941 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 KLF18A0A0U1RQI7 1052 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 GOLGA8AA7E2F4 631 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 GOLGA8BA8MQT2 603 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 H3BRB1 525 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 FOSP01100 380 aaPredicted RBP13.07□□□□□ -0.32
BEST3-209ENST00000548658 GDF6Q6KF10 455 aaPredicted RBP13.07□□□□□ -0.32
BEST3-209ENST00000548658 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 RAB11FIP4Q86YS3 637 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 GPRASP2Q96D09 838 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 TCEANC2Q96MN5 208 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
BEST3-209ENST00000548658 CDX2Q99626 313 aaPredicted RBP13.07□□□□□ -0.32
BEST3-209ENST00000548658 ALG1Q9BT22 464 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 ZNF576Q9H609 170 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 TUT1Q9H6E5 874 aaKnown RBP13.07□□□□□ -0.32
BEST3-209ENST00000548658 HDAC6Q9UBN7 1215 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
BEST3-209ENST00000548658 V9GY48 417 aaPredicted RBP13.07□□□□□ -0.32
BEST3-209ENST00000548658 ZNF286BP0CG31 522 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 SELPP16109 830 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 NAPAP54920 295 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 RBL2Q08999 1139 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 PTK7Q13308 1070 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 CYFIP1Q7L576 1253 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 DEFB128Q7Z7B8 93 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
BEST3-209ENST00000548658 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms