RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 OPLAHO14841 1288 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 RGS20O76081 388 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 GJB5O95377 273 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 GGPS1O95749 300 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 CXCL10P02778 98 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 THPOP40225 353 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 SP2Q02086 613 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 PTK7Q13308 1070 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 IMMTQ16891 758 aaKnown RBP13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 HSDL1Q3SXM5 330 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 IFIT1BQ5T764 474 aaKnown RBP13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 FCHSD1Q86WN1 690 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 PPTC7Q8NI37 304 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 ANKS1AQ92625 1134 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 RAD9AQ99638 391 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 C17orf80Q9BSJ5 609 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 BCAS3Q9H6U6 928 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 MYO7AQ13402 2215 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 XIRP2A4UGR9 3374 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 HAS3O00219 553 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 PPP1R11O60927 126 aaPredicted RBP13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 UPP2O95045 317 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 IGHDP01880 384 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 PLA2G5P39877 138 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 MBTPS1Q14703 1052 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 PGM5Q15124 567 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 TRIM71Q2Q1W2 868 aaKnown RBP13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 MYSM1Q5VVJ2 828 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 TRAF7Q6Q0C0 670 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 EP400NLQ6ZTU2 488 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 CHD1LQ86WJ1 897 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 MYOCDQ8IZQ8 938 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 DBF4BQ8NFT6 615 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 IL31RAQ8NI17 732 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 KRT23Q9C075 422 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 RWDD1Q9H446 243 aaPredicted RBP13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 MLXIPQ9HAP2 919 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 CD320Q9NPF0 282 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
TRAFD1-205ENST00000548277 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 LGR5O75473 907 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 F2P00734 622 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 HSD17B4P51659 736 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 ERVK-21P61565 698 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 CYB5R4Q7L1T6 521 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 OSBPL7Q9BZF2 842 aa13.89□□□□□ -0.19
TRAFD1-205ENST00000548277 TREHO43280 583 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 PPFIA4O75335 1185 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 AMHP03971 560 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 CTSHP09668 335 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 KCNA5P22460 613 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 RBL2Q08999 1139 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 TMEM31Q5JXX7 168 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 VSIG10LQ86VR7 867 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 TICAM2Q86XR7 235 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 EMID1Q96A84 441 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 PIGSQ96S52 555 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 DSCC1Q9BVC3 393 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 UBE2ZQ9H832 354 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 RTEL1Q9NZ71 1219 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 CTNNA3Q9UI47 895 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 MAD2L2Q9UI95 211 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 INSL6Q9Y581 213 aa13.88□□□□□ -0.19
TRAFD1-205ENST00000548277 C17orf102A2RUQ5 167 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 H3BRB1 525 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 ZBTB5O15062 677 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 UBA1P22314 1058 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 SP4Q02446 784 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 STOX1Q6ZVD7 989 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 MAF1Q9H063 256 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 IL25Q9H293 177 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 RNPEPQ9H4A4 650 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 TUT1Q9H6E5 874 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 CNNM2Q9H8M5 875 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 LMCD1Q9NZU5 365 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 ATG2AQ2TAZ0 1938 aa13.87□□□□□ -0.19
TRAFD1-205ENST00000548277 GCOM1H8Y6P7 765 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 HIP1O00291 1037 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 EFCAB14O75071 495 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 POLR2MP0CAP2 368 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 SMIM10L2AP0DMW4 78 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 SMIM10L2BP0DMW5 78 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 IL9P15248 144 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 CCND2P30279 289 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 SSTR3P32745 418 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 AAMPQ13685 434 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 SEC23AQ15436 765 aa13.86□□□□□ -0.19
TRAFD1-205ENST00000548277 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms