RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 NYAP2Q9P242 653 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
SCAF11-209ENST00000547018 CLIC2O15247 247 aa14.15□□□□□ -0.14
SCAF11-209ENST00000547018 FAM26FQ5R3K3 315 aa14.15□□□□□ -0.14
SCAF11-209ENST00000547018 ELOA2Q8IYF1 753 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-209ENST00000547018 TDRD12Q587J7 1177 aaKnown RBP14.15□□□□□ -0.14
SCAF11-209ENST00000547018 FKBP15Q5T1M5 1219 aa14.15□□□□□ -0.14
SCAF11-209ENST00000547018 SLC35F6Q8N357 371 aa14.15□□□□□ -0.14
SCAF11-209ENST00000547018 RDH13Q8NBN7 331 aa14.15□□□□□ -0.14
SCAF11-209ENST00000547018 ANKRD31Q8N7Z5 1873 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 ECM2O94769 699 aaPredicted RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 PRPF6O94906 941 aaKnown RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 EPS15P42566 896 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 R3HDM1Q15032 1099 aaKnown RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 FBXO38Q6PIJ6 1188 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 CACNA2D4Q7Z3S7 1137 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 LIMA1Q9UHB6 759 aaKnown RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 DUSP10Q9Y6W6 482 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 CCP110O43303 1012 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 IPO7O95373 1038 aaKnown RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 MRPS25P82663 173 aaKnown RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 COASYQ13057 564 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 KCTD19Q17RG1 926 aaPredicted RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 NSMFQ6X4W1 530 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 RRAGAQ7L523 313 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 DNAAF5Q86Y56 855 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 SUPT20HQ8NEM7 779 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 ZNHIT6Q9NWK9 470 aaKnown RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 LAMB1P07942 1786 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 ESYT2A0FGR8 921 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 WNT10BO00744 389 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 EPHB6O15197 1021 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 MYCLP12524 364 aaPredicted RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 RASSF7Q02833 373 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
SCAF11-209ENST00000547018 CATSPER3Q86XQ3 398 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 PLEKHA4Q9H4M7 779 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 HDAC6Q9UBN7 1215 aa14.14□□□□□ -0.15
SCAF11-209ENST00000547018 KIF2AO00139 706 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-209ENST00000547018 SEC31AO94979 1220 aaKnown RBP14.13□□□□□ -0.15
SCAF11-209ENST00000547018 RHOXF2BP0C7M4 288 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 MYOCDQ8IZQ8 938 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 OR8K1Q8NGG5 319 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 DCAF4Q8WV16 495 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 RHOXF2Q9BQY4 288 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 EPN1Q9Y6I3 576 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-209ENST00000547018 ABCB11O95342 1321 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 BICDL2A1A5D9 508 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 LGALS16A8MUM7 142 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 SRGAP2O75044 1071 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 CCDC122Q5T0U0 273 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 C7orf25Q9BPX7 421 aa14.13□□□□□ -0.15
SCAF11-209ENST00000547018 RAVER2Q9HCJ3 691 aaKnown RBP14.13□□□□□ -0.15
SCAF11-209ENST00000547018 EML1O00423 815 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 KCNA1Q09470 495 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 EHD4Q9H223 541 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 DNM3Q9UQ16 869 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 INPP5BP32019 993 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 CASP5P51878 434 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 TATDN1Q6P1N9 297 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 UNC13DQ70J99 1090 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 RTKN2Q8IZC4 609 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 DHTKD1Q96HY7 919 aaPredicted RBP14.12□□□□□ -0.15
SCAF11-209ENST00000547018 PIM2Q9P1W9 311 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 CCPG1Q9ULG6 757 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 ZNRF3Q9ULT6 936 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 PCDHB13Q9Y5F0 798 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 MSH4O15457 936 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 PEX10O60683 326 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 FLOT1O75955 427 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 GCNT3O95395 438 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 GTF2F1P35269 517 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCAF11-209ENST00000547018 PPP2R3AQ06190 1150 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 KCNB1Q14721 858 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 CYP26C1Q6V0L0 522 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 BANK1Q8NDB2 785 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 TSG101Q99816 390 aa14.12□□□□□ -0.15
SCAF11-209ENST00000547018 TMEM150BA6NC51 233 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 AKR1B10O60218 316 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 CLSTN1O94985 981 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 EIF2AK2P19525 551 aaKnown RBP14.11□□□□□ -0.15
SCAF11-209ENST00000547018 SMARCA1P28370 1054 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 MATR3P43243 847 aaKnown RBP eCLIP14.11□□□□□ -0.153e-6■■□□□ 12.9
SCAF11-209ENST00000547018 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.151e-7■■■□□ 15.7
SCAF11-209ENST00000547018 CIAPIN1Q6FI81 312 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 SFR1Q86XK3 245 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 ZKSCAN4Q969J2 545 aaPredicted RBP14.11□□□□□ -0.15
SCAF11-209ENST00000547018 ERO1AQ96HE7 468 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
SCAF11-209ENST00000547018 CDK5RAP2Q96SN8 1893 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 CTIFO43310 598 aaKnown RBP14.11□□□□□ -0.15
SCAF11-209ENST00000547018 DNM2P50570 870 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 LRCH2Q5VUJ6 765 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 PANX2Q96RD6 677 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 NDST4Q9H3R1 872 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 GOPCQ9HD26 462 aa14.11□□□□□ -0.15
SCAF11-209ENST00000547018 ENTPD3O75355 529 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 SPP2Q13103 211 aa14.1□□□□□ -0.15
SCAF11-209ENST00000547018 DALRD3Q5D0E6 543 aaKnown RBP14.1□□□□□ -0.15
SCAF11-209ENST00000547018 LDHDQ86WU2 507 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms