RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
CCDC38-202ENST00000546386 TAAR1Q96RJ0 339 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 BHMT2Q9H2M3 363 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 PICK1Q9NRD5 415 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 TFR2Q9UP52 801 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 FER1L6Q2WGJ9 1857 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
CCDC38-202ENST00000546386 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 LAD1O00515 517 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 CASP5P51878 434 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 NAA30Q147X3 362 aaPredicted RBP13.37□□□□□ -0.27
CCDC38-202ENST00000546386 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.37□□□□□ -0.27
CCDC38-202ENST00000546386 GPBP1Q86WP2 473 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 RAD54LQ92698 747 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
CCDC38-202ENST00000546386 B4DLN1 442 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 ITGB5P18084 799 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 CASP14P31944 242 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 NT5C2P49902 561 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 DACH1Q9UI36 760 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 TESPA1A2RU30 521 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 hCG_1984214I3L0E3 225 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 TBC1D12O60347 775 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 PLA2G4BP0C869 781 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 UBXN1Q04323 297 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 FSTL1Q12841 308 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 HERC4Q5GLZ8 1057 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 TREML2Q5T2D2 321 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 BTNL9Q6UXG8 535 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 ZNF713Q8N859 430 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 TRIML1Q8N9V2 468 aa13.36□□□□□ -0.27
CCDC38-202ENST00000546386 PRPF38AQ8NAV1 312 aaKnown RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 IRX2Q9BZI1 471 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 RANBP17Q9H2T7 1088 aaKnown RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 V9GYY5 206 aaPredicted RBP13.36□□□□□ -0.27
CCDC38-202ENST00000546386 SOWAHDA6NJG2 315 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 CTNND1O60716 968 aaKnown RBP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 SPATA31C1P0DKV0 1188 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 FXR1P51114 621 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 SPIRE1Q08AE8 756 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 ARSHQ5FYA8 562 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 E4F1Q66K89 784 aaPredicted RBP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 EEPD1Q7L9B9 569 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 NOC3LQ8WTT2 800 aaKnown RBP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 DYDC2Q96IM9 177 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 AK8Q96MA6 479 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 ATP9AO75110 1047 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 ABL1P00519 1130 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 ERCC5P28715 1186 aaPredicted RBP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 SREBF1P36956 1147 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 NR1I3Q14994 352 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 TCP11X2Q5H9J9 407 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 FKBP1CQ5VVH2 108 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 TOGARAM2Q6ZUX3 1019 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 GIMAP8Q8ND71 665 aaPredicted RBP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
CCDC38-202ENST00000546386 CRYGNQ8WXF5 182 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 ZNF577Q9BSK1 485 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 RAB34Q9BZG1 259 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
CCDC38-202ENST00000546386 IGLV3-22A0A075B6J6 115 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 TNNT1P13805 278 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 BACE1P56817 501 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 BAATQ14032 418 aaPredicted RBP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 VGLL4Q14135 290 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 SPECC1LQ69YQ0 1117 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 PPP1R18Q6NYC8 613 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 KRT26Q7Z3Y9 468 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 ZBTB9Q96C00 473 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 PCMTD1Q96MG8 357 aaPredicted RBP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 DUSP9Q99956 384 aaKnown RBP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 RUSC1Q9BVN2 902 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 PANK4Q9NVE7 773 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 ADD3Q9UEY8 706 aaKnown RBP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 RHOBTB3O94955 611 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 RPS12P25398 132 aaKnown RBP13.34□□□□□ -0.27
CCDC38-202ENST00000546386 CDC25BP30305 580 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 USP11P51784 963 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 GPR162Q16538 588 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 GPC2Q8N158 579 aa13.34□□□□□ -0.27
CCDC38-202ENST00000546386 CLEC4DQ8WXI8 215 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms