RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CCDC17Q96LX7 622 aa25.8■■□□□ 1.72
FOXA1-202ENST00000545425 ABCB6Q9NP58 842 aa25.8■■□□□ 1.72
FOXA1-202ENST00000545425 JRKLQ9Y4A0 524 aa25.8■■□□□ 1.72
FOXA1-202ENST00000545425 GLTPD2A6NH11 291 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 TACC1O75410 805 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 SYN2Q92777 582 aaPredicted RBP25.79■■□□□ 1.72
FOXA1-202ENST00000545425 MTMR8Q96EF0 704 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 CEP63Q96MT8 703 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 PSMD1Q99460 953 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 VAT1LQ9HCJ6 419 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 FER1L6Q2WGJ9 1857 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 POLR3GO15318 223 aaPredicted RBP25.79■■□□□ 1.72
FOXA1-202ENST00000545425 ABL1P00519 1130 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 FAM71BQ8TC56 605 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 SNX29Q8TEQ0 813 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 EHD4Q9H223 541 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 SERPINB13Q9UIV8 391 aa25.79■■□□□ 1.72
FOXA1-202ENST00000545425 SSU72P8A0A1W2PR75 194 aa25.78■■□□□ 1.72
FOXA1-202ENST00000545425 VSNL1P62760 191 aa25.78■■□□□ 1.72
FOXA1-202ENST00000545425 MCM6Q14566 821 aa25.78■■□□□ 1.72
FOXA1-202ENST00000545425 HSP90B2PQ58FF3 399 aa25.78■■□□□ 1.72
FOXA1-202ENST00000545425 MOXD1Q6UVY6 613 aa25.78■■□□□ 1.72
FOXA1-202ENST00000545425 NMRK2Q9NPI5 230 aa25.78■■□□□ 1.72
FOXA1-202ENST00000545425 GREB1LQ9C091 1923 aaPredicted RBP25.78■■□□□ 1.72
FOXA1-202ENST00000545425 MUM1L1Q5H9M0 696 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 TEX2Q8IWB9 1127 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 UBA5Q9GZZ9 404 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 SLC39A2Q9NP94 309 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 LUC7LQ9NQ29 371 aaKnown RBP25.77■■□□□ 1.72
FOXA1-202ENST00000545425 POLLQ9UGP5 575 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 ATP6V0A2Q9Y487 856 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 HLA-DOAP06340 250 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 RHOXF2BP0C7M4 288 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 MAPK8IP2Q13387 824 aaPredicted RBP25.77■■□□□ 1.72
FOXA1-202ENST00000545425 CASP8Q14790 479 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 MYOCDQ8IZQ8 938 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 ALS2CR12Q96Q35 445 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 RHOXF2Q9BQY4 288 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 CPVLQ9H3G5 476 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 TMEM260Q9NX78 707 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 TSKSQ9UJT2 592 aa25.77■■□□□ 1.72
FOXA1-202ENST00000545425 PJA2O43164 708 aa25.76■■□□□ 1.71
FOXA1-202ENST00000545425 ATP1A1P05023 1023 aaKnown RBP25.76■■□□□ 1.71
FOXA1-202ENST00000545425 FKBP3Q00688 224 aaKnown RBP25.76■■□□□ 1.71
FOXA1-202ENST00000545425 HHIPL2Q6UWX4 724 aa25.76■■□□□ 1.71
FOXA1-202ENST00000545425 GPR101Q96P66 508 aaPredicted RBP25.76■■□□□ 1.71
FOXA1-202ENST00000545425 JMJD4Q9H9V9 463 aa25.76■■□□□ 1.71
FOXA1-202ENST00000545425 ZNF277Q9NRM2 450 aaPredicted RBP25.76■■□□□ 1.71
FOXA1-202ENST00000545425 DDX25Q9UHL0 483 aaKnown RBP25.76■■□□□ 1.71
FOXA1-202ENST00000545425 ZBTB5O15062 677 aa25.75■■□□□ 1.71
FOXA1-202ENST00000545425 AARSP49588 968 aaKnown RBP eCLIP25.75■■□□□ 1.71
FOXA1-202ENST00000545425 USP11P51784 963 aa25.75■■□□□ 1.71
FOXA1-202ENST00000545425 NCAPH2Q6IBW4 605 aa25.75■■□□□ 1.71
FOXA1-202ENST00000545425 LRRC55Q6ZSA7 311 aa25.75■■□□□ 1.71
FOXA1-202ENST00000545425 NOA1Q8NC60 698 aaKnown RBP25.75■■□□□ 1.71
FOXA1-202ENST00000545425 C6orf229H3BNL8 230 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 SLC37A4O43826 429 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 TCP1P17987 556 aaKnown RBP25.74■■□□□ 1.71
FOXA1-202ENST00000545425 MARSP56192 900 aaKnown RBP25.74■■□□□ 1.71
FOXA1-202ENST00000545425 PPP4R3CPQ6ZMV5 832 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 RNF10Q8N5U6 811 aaKnown RBP25.74■■□□□ 1.71
FOXA1-202ENST00000545425 DDX12PQ92771 950 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 IFIH1Q9BYX4 1025 aaKnown RBP25.74■■□□□ 1.71
FOXA1-202ENST00000545425 SH2D4AQ9H788 454 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 TRIM10Q9UDY6 481 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 TDP2O95551 362 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 AKR1B1P15121 316 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 DPP8Q6V1X1 898 aaPredicted RBP25.74■■□□□ 1.71
FOXA1-202ENST00000545425 CCDC65Q8IXS2 484 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 ADGRF4Q8IZF3 695 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 KCTD17Q8N5Z5 321 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 NEK11Q8NG66 645 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 COA7Q96BR5 231 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 RNF14Q9UBS8 474 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 ADAM21Q9UKJ8 722 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 FAM184BQ9ULE4 1060 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 PCDHA13Q9Y5I0 950 aa25.74■■□□□ 1.71
FOXA1-202ENST00000545425 FRMPD2Q68DX3 1309 aaPredicted RBP25.73■■□□□ 1.71
FOXA1-202ENST00000545425 TOMM70O94826 608 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 IDEP14735 1019 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 TNNI2P48788 182 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 MMGT1Q8N4V1 131 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 MRIQ9BWK5 157 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 LACRTQ9GZZ8 138 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 DEF6Q9H4E7 631 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 RRAGCQ9HB90 399 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 SNX12Q9UMY4 172 aa25.73■■□□□ 1.71
FOXA1-202ENST00000545425 KIF11P52732 1056 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 ZCWPW2Q504Y3 356 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 SLFN12Q8IYM2 578 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 DCAF4Q8WV16 495 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 PDE11AQ9HCR9 933 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 CWC15Q9P013 229 aaKnown RBP25.72■■□□□ 1.71
FOXA1-202ENST00000545425 COL4A3BPQ9Y5P4 624 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 PITPNM2Q9BZ72 1349 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 CYP3A7-CYP3A51PA0A087WV96 503 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 EDIL3O43854 480 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 CYP3A7P24462 503 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 GTF2IP78347 998 aa25.72■■□□□ 1.71
FOXA1-202ENST00000545425 AP3B2Q13367 1082 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms