RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 KLHL14Q9P2G3 628 aa9.83□□□□□ -0.84
NECAP1-207ENST00000544891 H7C1W4 665 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 KCNK3O14649 394 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 CAPN9O14815 690 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 CTNNA1P35221 906 aaKnown RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 KIF23Q02241 960 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 LRRC63Q05C16 580 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 SHANK3Q9BYB0 1731 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 SH2B2O14492 632 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 TLR3O15455 904 aaKnown RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 MMP1P03956 469 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 CCNE1P24864 410 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 ASPHQ12797 758 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 CCDC93Q567U6 631 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 CASC4Q6P4E1 433 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 FAM71BQ8TC56 605 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 TRIM31Q9BZY9 425 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 BSDC1Q9NW68 430 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 NDUFB9Q9Y6M9 179 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 CASQ2O14958 399 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 EVI5O60447 810 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 RTKN2Q8IZC4 609 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 LINC00301Q8NCQ3 95 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 STAMQ92783 540 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 THAP9Q9H5L6 903 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 ZHX1Q9UKY1 873 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 SRPRBQ9Y5M8 271 aaKnown RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 STK36Q9NRP7 1315 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 NUP188Q5SRE5 1749 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 TBC1D8O95759 1140 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 AFPP02771 609 aaKnown RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 FDX1P10109 184 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 NPR1P16066 1061 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 NDUFA8P51970 172 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 ARMC9Q7Z3E5 817 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 LRRC47Q8N1G4 583 aaKnown RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 CNOT6LQ96LI5 555 aaKnown RBP9.82□□□□□ -0.84
NECAP1-207ENST00000544891 VCX3AQ9NNX9 186 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 DONSONQ9NYP3 566 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 RWDD2AQ9UIY3 292 aa9.82□□□□□ -0.84
NECAP1-207ENST00000544891 MED7O43513 233 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 ZBED6P86452 979 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 BFSP1Q12934 665 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 GRAPQ13588 217 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 MIS18BP1Q6P0N0 1132 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 PPM1KQ8N3J5 372 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 GRAPLQ8TC17 118 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-207ENST00000544891 ZNF408Q9H9D4 720 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 ST7Q9NRC1 585 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 ADKP55263 362 aaKnown RBP9.81□□□□□ -0.84
NECAP1-207ENST00000544891 MYL7Q01449 175 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 PTPN12Q05209 780 aaKnown RBP9.81□□□□□ -0.84
NECAP1-207ENST00000544891 PPP1R18Q6NYC8 613 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 POMGNT1Q8WZA1 660 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 PBKQ96KB5 322 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 AXIN2Q9Y2T1 843 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 AFDNP55196 1824 aaKnown RBP9.81□□□□□ -0.84
NECAP1-207ENST00000544891 USP42Q9H9J4 1324 aaKnown RBP9.81□□□□□ -0.84
NECAP1-207ENST00000544891 SRGAP2BP0DMP2 458 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 ATF2P15336 505 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 ADCY8P40145 1251 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 RAD51AP2Q09MP3 1159 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 SEPT6Q14141 434 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 FAM193BQ96PV7 902 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-207ENST00000544891 KIAA1024Q9UPX6 916 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 AFG3L2Q9Y4W6 797 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 CDHR2Q9BYE9 1310 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 hCG_1642624A0A1W2PR95 340 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 KIF3CO14782 793 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 PCK1P35558 622 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-207ENST00000544891 FAM186BQ8IYM0 893 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 NEK9Q8TD19 979 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 ANKRD36BP1Q96IX9 119 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 MID2Q9UJV3 735 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 BCS1LQ9Y276 419 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 FAN1Q9Y2M0 1017 aa9.81□□□□□ -0.84
NECAP1-207ENST00000544891 NR2F2P24468 414 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 OAS2P29728 719 aaKnown RBP9.8□□□□□ -0.84
NECAP1-207ENST00000544891 KPNA2P52292 529 aaKnown RBP9.8□□□□□ -0.84
NECAP1-207ENST00000544891 ZNF131P52739 623 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 RNASE9P60153 205 aaKnown RBP9.8□□□□□ -0.84
NECAP1-207ENST00000544891 PRPSAP1Q14558 356 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 CCDC38Q502W7 563 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 SLFN12LQ6IEE8 588 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 CTAGE3PQ8IX95 158 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 RPUSD2Q8IZ73 545 aaKnown RBP9.8□□□□□ -0.84
NECAP1-207ENST00000544891 ZNF579Q8NAF0 562 aaKnown RBP9.8□□□□□ -0.84
NECAP1-207ENST00000544891 ZNF577Q9BSK1 485 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 CCDC68Q9H2F9 335 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 FBXO40Q9UH90 709 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 ASAP1Q9ULH1 1129 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.8□□□□□ -0.84
NECAP1-207ENST00000544891 LRRIQ4A6NIV6 560 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 F8W8V4 182 aa9.8□□□□□ -0.84
NECAP1-207ENST00000544891 HNRNPDLO14979 420 aaKnown RBP9.8□□□□□ -0.84
NECAP1-207ENST00000544891 IFNB1P01574 187 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms