RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 PODNQ7Z5L7 613 aa4.19□□□□□ -1.74
BRCA2-206ENST00000544455 CCDC47Q96A33 483 aaKnown RBP4.19□□□□□ -1.74
BRCA2-206ENST00000544455 JAKMIP2Q96AA8 810 aa4.19□□□□□ -1.74
BRCA2-206ENST00000544455 DEF6Q9H4E7 631 aa4.19□□□□□ -1.74
BRCA2-206ENST00000544455 ZNF263O14978 683 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CCP110O43303 1012 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CHMP4BP1P59074 171 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 FAM84AQ96KN4 292 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 AGBL1Q96MI9 1066 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 PANX2Q96RD6 677 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 DNAJC7Q99615 494 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 BHMT2Q9H2M3 363 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CHORDC1Q9UHD1 332 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 THSD7AQ9UPZ6 1657 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 COL5A3P25940 1745 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CASP4P49662 377 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CLK2P49760 499 aaKnown RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 SP4Q02446 784 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 TCERG1LQ5VWI1 586 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 TMCO3Q6UWJ1 677 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 LZTS2Q9BRK4 669 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CCSER1Q9C0I3 900 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 PI4KBQ9UBF8 816 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 LGALS16A8MUM7 142 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 MYBL2P10244 700 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 EIF4A3P38919 411 aaKnown RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 KCNMA1Q12791 1236 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 TPH2Q8IWU9 490 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 REEP2Q9BRK0 252 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 PACSIN1Q9BY11 444 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 MYO1BO43795 1136 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 SLC7A5Q01650 507 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 SLC15A2Q16348 729 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CNNM4Q6P4Q7 775 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 FAM133AQ8N9E0 248 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 LRRC10BA6NIK2 292 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 EFCAB8A8MWE9 144 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 TADA3O75528 432 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 FTCDO95954 541 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 DPEP1P16444 411 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 MAP3K9P80192 1104 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 TSR1Q2NL82 804 aaKnown RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CAPN6Q9Y6Q1 641 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 WNK3Q9BYP7 1800 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 PLA2G4AP47712 749 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 RASSF7Q02833 373 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 SYDE2Q5VT97 1194 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 LARGE2Q8N3Y3 721 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 ZSWIM2Q8NEG5 633 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 OR8K1Q8NGG5 319 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 DNAJC19Q96DA6 116 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 EMILIN3Q9NT22 766 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CTAGE9A4FU28 777 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 EML1O00423 815 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 ZBTB7AO95365 584 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 PLA2G4BP0C869 781 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 H2AFXP16104 143 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 RAPGEF1Q13905 1077 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 DCAF17Q5H9S7 520 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 GALNT17Q6IS24 598 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 UNC13DQ70J99 1090 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 NAPGQ99747 312 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 WDR18Q9BV38 432 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 ZNF70Q9UC06 446 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CACNA1FO60840 1977 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 H3BQF6 201 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 LAD1O00515 517 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 FAM193AP78312 1265 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 ARHGAP4P98171 946 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 KCNB1Q14721 858 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 FAM26FQ5R3K3 315 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 NFRKBQ6P4R8 1299 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 POTEAQ6S8J7 498 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 TMTC1Q8IUR5 882 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 DYDC2Q96IM9 177 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 ZDHHC15Q96MV8 337 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 C7orf25Q9BPX7 421 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 ABCB6Q9NP58 842 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 TELO2Q9Y4R8 837 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 KIF2AO00139 706 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 MRPL12P52815 198 aaKnown RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 SAMD7Q7Z3H4 446 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 CACNA2D4Q7Z3S7 1137 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 AJAP1Q9UKB5 411 aaPredicted RBP4.18□□□□□ -1.74
BRCA2-206ENST00000544455 MYO6Q9UM54 1294 aa4.18□□□□□ -1.74
BRCA2-206ENST00000544455 SPDYE3A6NKU9 549 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 TBC1D8O95759 1140 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 SLC9A1P19634 815 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 VSNL1P62760 191 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 AK8Q96MA6 479 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 TRERF1Q96PN7 1200 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 RABEP2Q9H5N1 569 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 RAVER2Q9HCJ3 691 aaKnown RBP4.17□□□□□ -1.74
BRCA2-206ENST00000544455 HYOU1Q9Y4L1 999 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 DDX60LQ5H9U9 1706 aaKnown RBP4.17□□□□□ -1.74
BRCA2-206ENST00000544455 BMP3P12645 472 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 CYP11B2P19099 503 aa4.17□□□□□ -1.74
BRCA2-206ENST00000544455 NMT1P30419 496 aaKnown RBP4.17□□□□□ -1.74
BRCA2-206ENST00000544455 FXR2P51116 673 aaKnown RBP eCLIP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms