RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 C12orf49Q9H741 205 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 DNAJC18Q9H819 358 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 MKNK2Q9HBH9 465 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CABP5Q9NP86 173 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 CHST12Q9NRB3 414 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 TCEAL9Q9UHQ7 104 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 ZMYM6O95789 1325 aa5.99□□□□□ -1.45
CLIP1-217ENST00000543205 SLC35F4A4IF30 521 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 MPHOSPH10O00566 681 aaKnown RBP5.98□□□□□ -1.45
CLIP1-217ENST00000543205 ZNF213O14771 459 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 GDF11O95390 407 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 MPSTP25325 297 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 SHMT1P34896 483 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 GSK3AP49840 483 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 PTH1RQ03431 593 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 GABPAQ06546 454 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 IMMTQ16891 758 aaKnown RBP5.98□□□□□ -1.45
CLIP1-217ENST00000543205 ABCB5Q2M3G0 1257 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 NOL9Q5SY16 702 aaKnown RBP5.98□□□□□ -1.45
CLIP1-217ENST00000543205 CYP4F22Q6NT55 531 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 TATDN1Q6P1N9 297 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 RIPOR1Q6ZS17 1223 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 ZNF444Q8N0Y2 327 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-217ENST00000543205 PGBD3Q8N328 593 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 SLC44A5Q8NCS7 719 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 CAPNS2Q96L46 248 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 SRPK1Q96SB4 655 aaKnown RBP5.98□□□□□ -1.45
CLIP1-217ENST00000543205 MPHOSPH6Q99547 160 aaKnown RBP5.98□□□□□ -1.45
CLIP1-217ENST00000543205 SAP130Q9H0E3 1048 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 FANCLQ9NW38 375 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 SNCAIPQ9Y6H5 919 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 FOCADQ5VW36 1801 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 NAV1Q8NEY1 1877 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 FAM221BA6H8Z2 402 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 SMIM22K7EJ46 135 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 F11P03951 625 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 ASNSP08243 561 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 PTPRAP18433 802 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 GNALP38405 381 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 GJA8P48165 433 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 VEGFBP49765 207 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 HAND2P61296 217 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 PPATQ06203 517 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 DGKZQ13574 1117 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 RAB3GAP1Q15042 981 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 COX20Q5RI15 118 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 ERO1BQ86YB8 467 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 RASAL3Q86YV0 1011 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 WDR75Q8IWA0 830 aaKnown RBP5.98□□□□□ -1.45
CLIP1-217ENST00000543205 CCDC155Q8N6L0 562 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 HELQQ8TDG4 1101 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 OPTNQ96CV9 577 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 MYO19Q96H55 970 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 WNK4Q96J92 1243 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 CCDC17Q96LX7 622 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 TOMM22Q9NS69 142 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 GINM1Q9NU53 330 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 ANAPC4Q9UJX5 808 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 PRKAB1Q9Y478 270 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 ZHX2Q9Y6X8 837 aa5.98□□□□□ -1.45
CLIP1-217ENST00000543205 WDR33Q9C0J8 1336 aaKnown RBP5.97□□□□□ -1.45
CLIP1-217ENST00000543205 ROBO3Q96MS0 1386 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 CDK5RAP2Q96SN8 1893 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 MYH1P12882 1939 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 PRDM1O75626 825 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 REC8O95072 547 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 GH2P01242 217 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 ZBTB48P10074 688 aaPredicted RBP5.97□□□□□ -1.45
CLIP1-217ENST00000543205 LBX1P52954 281 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 PLCB3Q01970 1234 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 NOGQ13253 232 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 DHX8Q14562 1220 aaKnown RBP5.97□□□□□ -1.45
CLIP1-217ENST00000543205 RRP1BQ14684 758 aaKnown RBP5.97□□□□□ -1.45
CLIP1-217ENST00000543205 MFSD6Q6ZSS7 791 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 CKAP2LQ8IYA6 745 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 MAP4K1Q92918 833 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 LSG1Q9H089 658 aaKnown RBP5.97□□□□□ -1.45
CLIP1-217ENST00000543205 RNF41Q9H4P4 317 aaPredicted RBP5.97□□□□□ -1.45
CLIP1-217ENST00000543205 AS3MTQ9HBK9 375 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 NEUROD4Q9HD90 331 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 KLK14Q9P0G3 267 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 ZBTB21Q9ULJ3 1066 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 RBM8AQ9Y5S9 174 aaKnown RBP5.97□□□□□ -1.45
CLIP1-217ENST00000543205 COMMD10Q9Y6G5 202 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 PDE4DIPQ5VU43 2346 aa5.97□□□□□ -1.45
CLIP1-217ENST00000543205 CCDC85CA6NKD9 419 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 FAM155AB1AL88 458 aaPredicted RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 PPP1R12AO14974 1030 aaPredicted RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 RANBP6O60518 1105 aaKnown RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 AOC2O75106 756 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 LDHAP00338 332 aaKnown RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 TSPY3P0CV98 308 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 TSPY8P0CW00 308 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 PCP11498 1178 aaKnown RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 AKR1B1P15121 316 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 NPR3P17342 541 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 RGS19P49795 217 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 GTF2A2P52657 109 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 PPIL2Q13356 520 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 RRP12Q5JTH9 1297 aaKnown RBP5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms