RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 PCMTD1Q96MG8 357 aaPredicted RBP18.18■□□□□ 0.5
COL4A1-204ENST00000543140 MBOAT7Q96N66 472 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 LRRC27Q9C0I9 530 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 PANK4Q9NVE7 773 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 KDM3AQ9Y4C1 1321 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 PLA2G4BP0C869 781 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 CXCL9Q07325 125 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 ERCC6LQ2NKX8 1250 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 COBLL1Q53SF7 1204 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 NCAPH2Q6IBW4 605 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 GUF1Q8N442 669 aaKnown RBP18.18■□□□□ 0.5
COL4A1-204ENST00000543140 LENG9Q96B70 501 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 GLIS2Q9BZE0 524 aaPredicted RBP18.18■□□□□ 0.5
COL4A1-204ENST00000543140 GOPCQ9HD26 462 aa18.18■□□□□ 0.5
COL4A1-204ENST00000543140 MEIS1O00470 390 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 ABL1P00519 1130 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 CFBP00751 764 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 SREBF1P36956 1147 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 EHHADHQ08426 723 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 HYIQ5T013 277 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 GPBP1Q86WP2 473 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 OR8K1Q8NGG5 319 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 SLF1Q9BQI6 1058 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 FGFBP2Q9BYJ0 223 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 BMP2KQ9NSY1 1161 aaPredicted RBP18.17■□□□□ 0.5
COL4A1-204ENST00000543140 AGPAT5Q9NUQ2 364 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 FOSP01100 380 aaPredicted RBP18.17■□□□□ 0.5
COL4A1-204ENST00000543140 TRIM21P19474 475 aaKnown RBP18.17■□□□□ 0.5
COL4A1-204ENST00000543140 ZNF76P36508 570 aa18.17■□□□□ 0.5
COL4A1-204ENST00000543140 RASSF10A6NK89 507 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 PSMC6P62333 389 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 SPIRE1Q08AE8 756 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 MOXD1Q6UVY6 613 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 SLC30A10Q6XR72 485 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 CATSPER3Q86XQ3 398 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 ZHX3Q9H4I2 956 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 CAPN11Q9UMQ6 739 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 UTRNP46939 3433 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 MMP14P50281 582 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 GLIPR1L2Q4G1C9 344 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 CARD6Q9BX69 1037 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 FBXO28Q9NVF7 368 aa18.16■□□□□ 0.5
COL4A1-204ENST00000543140 MSH4O15457 936 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 ZBTB7AO95365 584 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 UBXN2AP68543 259 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 PSMD2Q13200 908 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 Q4G0T1 1027 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 FAM26FQ5R3K3 315 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 MYOCDQ8IZQ8 938 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
COL4A1-204ENST00000543140 WNT10BO00744 389 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 KRT18P05783 430 aaKnown RBP18.15■□□□□ 0.5
COL4A1-204ENST00000543140 CYP4A11Q02928 519 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 ARHGAP29Q52LW3 1261 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 MNS1Q8NEH6 495 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 DNAJC7Q99615 494 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 ZMYND15Q9H091 742 aa18.15■□□□□ 0.5
COL4A1-204ENST00000543140 CYP11B2P19099 503 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 CAP2P40123 477 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 PABPC4Q13310 644 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL4A1-204ENST00000543140 TSR1Q2NL82 804 aaKnown RBP18.14■□□□□ 0.49
COL4A1-204ENST00000543140 HERC4Q5GLZ8 1057 aaPredicted RBP18.14■□□□□ 0.49
COL4A1-204ENST00000543140 MCTP2Q6DN12 878 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 WDR59Q6PJI9 974 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 NELFCDQ8IXH7 590 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 AGBL3Q8NEM8 1001 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 PPP1R1BQ9UD71 204 aaPredicted RBP18.14■□□□□ 0.49
COL4A1-204ENST00000543140 KIF5CO60282 957 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 LRRC63Q05C16 580 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 ARSHQ5FYA8 562 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 ZNF569Q5MCW4 686 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 FKBP15Q5T1M5 1219 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 HAUS3Q68CZ6 603 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 VCPKMTQ9H867 229 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 PIM2Q9P1W9 311 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 SYNPO2Q9UMS6 1093 aa18.14■□□□□ 0.49
COL4A1-204ENST00000543140 EPN1Q9Y6I3 576 aaPredicted RBP18.14■□□□□ 0.49
COL4A1-204ENST00000543140 SPATA31C1P0DKV0 1188 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 VWA3BQ502W6 1294 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 LRRC55Q6ZSA7 311 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 CCDC65Q8IXS2 484 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 CCDC94Q9BW85 323 aaPredicted RBP18.13■□□□□ 0.49
COL4A1-204ENST00000543140 TTYH3Q9C0H2 523 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
COL4A1-204ENST00000543140 TBX3O15119 743 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 NDUFA10O95299 355 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 SLC12A3P55017 1021 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 MAP3K9P80192 1104 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 ERMNQ8TAM6 284 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 TSG101Q99816 390 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 NDST4Q9H3R1 872 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 POLD4Q9HCU8 107 aa18.13■□□□□ 0.49
COL4A1-204ENST00000543140 PIK3CDO00329 1044 aa18.12■□□□□ 0.49
COL4A1-204ENST00000543140 TRAF5O00463 557 aa18.12■□□□□ 0.49
COL4A1-204ENST00000543140 EGFRP00533 1210 aa18.12■□□□□ 0.49
COL4A1-204ENST00000543140 CIITAP33076 1130 aa18.12■□□□□ 0.49
COL4A1-204ENST00000543140 FKBP1CQ5VVH2 108 aa18.12■□□□□ 0.49
COL4A1-204ENST00000543140 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
COL4A1-204ENST00000543140 FAM20AQ96MK3 541 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms