RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 C8orf74Q6P047 294 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SPATS2Q86XZ4 545 aaKnown RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 GUF1Q8N442 669 aaKnown RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SH2D3CQ8N5H7 860 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SYN2Q92777 582 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 MS4A14Q96JA4 679 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 RNPC3Q96LT9 517 aaKnown RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 INPP4AQ96PE3 977 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 GGA2Q9UJY4 613 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 MINPP1Q9UNW1 487 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SAMM50Q9Y512 469 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 ANKRD31Q8N7Z5 1873 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SNED1Q8TER0 1413 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 PVALEFA0A1B0GWK0 134 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 MYMKA6NI61 221 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 TSPY2A6NKD2 308 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 COQ9O75208 318 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 KRT14P02533 472 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 KLRK1P26718 216 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 HOXA7P31268 230 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 INPP5BP32019 993 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 LSP1P33241 339 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 SLC1A4P43007 532 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 MAGEA1P43355 309 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 CRKLP46109 303 aaKnown RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 GNAQP50148 359 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 NAP1L1P55209 391 aaKnown RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 GFPT1Q06210 699 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 ORC2Q13416 577 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 ZCWPW2Q504Y3 356 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 C12orf60Q5U649 245 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 FBXW10Q5XX13 1052 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 TTC19Q6DKK2 380 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 UNC13DQ70J99 1090 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 CCDC84Q86UT8 332 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 CASKIN2Q8WXE0 1202 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 PNMA5Q96PV4 448 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 MTMR9Q96QG7 549 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 EPN3Q9H201 632 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 FAM207AQ9NSI2 230 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-209ENST00000542879 PCDHGC5Q9Y5F6 944 aa6.21□□□□□ -1.42
ZEB1-209ENST00000542879 ZSCAN5CA6NGD5 496 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 MEFVO15553 781 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 ECHS1P30084 290 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 LRRC63Q05C16 580 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 DDR1Q08345 913 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 PTGISQ16647 500 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 MEI1Q5TIA1 1274 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 NAA35Q5VZE5 725 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 C6orf89Q6UWU4 347 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 B4GALNT4Q76KP1 1039 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 RRAGAQ7L523 313 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 IFT20Q8IY31 132 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 EIF1ADQ8N9N8 165 aaKnown RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CCDC47Q96A33 483 aaKnown RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 PCMTD1Q96MG8 357 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CCDC43Q96MW1 224 aaKnown RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 SPZ1Q9BXG8 430 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 SLC39A2Q9NP94 309 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 A1CFQ9NQ94 594 aaKnown RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 H0YGN5 161 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CES2O00748 559 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 USP17L8P0C7I0 530 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 HSPA9P38646 679 aaKnown RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 PAFAH1B1P43034 410 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 MATR3P43243 847 aaKnown RBP eCLIP6.2□□□□□ -1.423e-6■■■□□ 19
ZEB1-209ENST00000542879 AMPD3Q01432 767 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 TFAP4Q01664 338 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 RASSF7Q02833 373 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 PAK2Q13177 524 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 ITGB3BPQ13352 177 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 NAB2Q15742 525 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 SKIDA1Q1XH10 827 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CFAP221Q4G0U5 840 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CAVIN4Q5BKX8 364 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 KRT25Q7Z3Z0 450 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CCDC125Q86Z20 511 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 RASSF8Q8NHQ8 419 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 NOX5Q96PH1 765 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 PSMB7Q99436 277 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 DEF6Q9H4E7 631 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 RABEP2Q9H5N1 569 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 STK17AQ9UEE5 414 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 NFU1Q9UMS0 254 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 NIP7Q9Y221 180 aaKnown RBP eCLIP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 NFS1Q9Y697 457 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 GREB1LQ9C091 1923 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 BTNL10A8MVZ5 291 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 AKR1B10O60218 316 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 HEXIM1O94992 359 aaKnown RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 PRDX5P30044 214 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 FXR2P51116 673 aaKnown RBP eCLIP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CDC37Q16543 378 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CCDC181Q5TID7 509 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 ZNF473Q8WTR7 871 aaKnown RBP6.2□□□□□ -1.42
ZEB1-209ENST00000542879 CEP72Q9P209 647 aa6.2□□□□□ -1.42
ZEB1-209ENST00000542879 ADAMTSL1Q8N6G6 1762 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NDUFAB1O14561 156 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 BUB1O43683 1085 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 CCNT1O60563 726 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms