RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.13
DDX11-223ENST00000542838 POTEMA6NI47 508 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 ZEB2O60315 1214 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 GUCY2FP51841 1108 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 ORC2Q13416 577 aaPredicted RBP14.26□□□□□ -0.13
DDX11-223ENST00000542838 DIXDC1Q155Q3 683 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 SNX29Q8TEQ0 813 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 RAD54LQ92698 747 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 KAT2BQ92831 832 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 NLRP3Q96P20 1036 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 MTMR9Q96QG7 549 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 RIC8AQ9NPQ8 531 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 RBAK-RBAKDNI3L0D1 243 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 BAG3O95817 575 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 SERPING1P05155 500 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 IQCKQ8N0W5 287 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 KRT12Q99456 494 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 LUC7LQ9NQ29 371 aaKnown RBP14.26□□□□□ -0.13
DDX11-223ENST00000542838 CEP72Q9P209 647 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 TRAF5O00463 557 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 SLC37A4O43826 429 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX11-223ENST00000542838 RNASE9P60153 205 aaKnown RBP14.26□□□□□ -0.13
DDX11-223ENST00000542838 APBA1Q02410 837 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 FAM83BQ5T0W9 1011 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 TBC1D9BQ66K14 1250 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 SUGP1Q8IWZ8 645 aaKnown RBP14.26□□□□□ -0.13
DDX11-223ENST00000542838 CCDC24Q8N4L8 307 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 EYA3Q99504 573 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 NUDT12Q9BQG2 462 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 LSM14BQ9BX40 385 aaKnown RBP14.26□□□□□ -0.13
DDX11-223ENST00000542838 POLD4Q9HCU8 107 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 COL4A3BPQ9Y5P4 624 aa14.26□□□□□ -0.13
DDX11-223ENST00000542838 TLR2O60603 784 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 GUCY2CP25092 1073 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 POLR2FP61218 127 aaKnown RBP14.25□□□□□ -0.13
DDX11-223ENST00000542838 PSMD2Q13200 908 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 KRT79Q5XKE5 535 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 B4GALNT4Q76KP1 1039 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 RNPC3Q96LT9 517 aaKnown RBP14.25□□□□□ -0.13
DDX11-223ENST00000542838 RAB34Q9BZG1 259 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 UBA5Q9GZZ9 404 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 NUCKS1Q9H1E3 243 aaKnown RBP14.25□□□□□ -0.13
DDX11-223ENST00000542838 PACSIN2Q9UNF0 486 aaPredicted RBP14.25□□□□□ -0.13
DDX11-223ENST00000542838 NAV1Q8NEY1 1877 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 NOL4O94818 638 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 TDP2O95551 362 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 KLRC1P26715 233 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 KDM7AQ6ZMT4 941 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 KCNK18Q7Z418 384 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 MYOCDQ8IZQ8 938 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 PROM2Q8N271 834 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 CASKIN2Q8WXE0 1202 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDX11-223ENST00000542838 LRRC27Q9C0I9 530 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 ZNF287Q9HBT7 754 aa14.25□□□□□ -0.13
DDX11-223ENST00000542838 WNK3Q9BYP7 1800 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 CDK8P49336 464 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 FKBP3Q00688 224 aaKnown RBP14.24□□□□□ -0.13
DDX11-223ENST00000542838 ARID5AQ03989 594 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 EHHADHQ08426 723 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 NAB2Q15742 525 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 SMIM5Q71RC9 77 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
DDX11-223ENST00000542838 GRID2IPA4D2P6 1211 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 GSTO1P78417 241 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 ENOX2Q16206 610 aaKnown RBP14.24□□□□□ -0.13
DDX11-223ENST00000542838 GRIK5Q16478 980 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 FBXW10Q5XX13 1052 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 WDR66Q8TBY9 1149 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 SYN2Q92777 582 aaPredicted RBP14.24□□□□□ -0.13
DDX11-223ENST00000542838 ATP6V0A2Q9Y487 856 aa14.24□□□□□ -0.13
DDX11-223ENST00000542838 KIAA0754O94854 1291 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 GUCY1A3Q02108 690 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 COASYQ13057 564 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 RAPGEF1Q13905 1077 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 MEI1Q5TIA1 1274 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 ARHGAP27Q6ZUM4 889 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 MREGQ8N565 214 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 MARCH10Q8NA82 808 aaPredicted RBP14.23□□□□□ -0.13
DDX11-223ENST00000542838 PIK3R5Q8WYR1 880 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 NR1D1P20393 614 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 LSP1P33241 339 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 PDIA5Q14554 519 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 CD302Q8IX05 232 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 COA7Q96BR5 231 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 HOXA7P31268 230 aaPredicted RBP14.23□□□□□ -0.13
DDX11-223ENST00000542838 TRADDQ15628 312 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 CDC37Q16543 378 aaPredicted RBP14.23□□□□□ -0.13
DDX11-223ENST00000542838 SLC18A3Q16572 532 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 KIAA0753Q2KHM9 967 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 OTUD6BQ8N6M0 293 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 NEDD1Q8NHV4 660 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 WHAMMQ8TF30 809 aa14.23□□□□□ -0.13
DDX11-223ENST00000542838 ROBO1Q9Y6N7 1651 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms