RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 AP5Z1O43299 807 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 BMP6P22004 513 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 SARSP49591 514 aaKnown RBP9.76□□□□□ -0.85
THBS3-210ENST00000541576 NLRP12P59046 1061 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 HERVK_113P62684 666 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 IQCB1Q15051 598 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 CEP55Q53EZ4 464 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 KRT79Q5XKE5 535 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 CALML4Q96GE6 196 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 PDLIM2Q96JY6 352 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 FAM20AQ96MK3 541 aa9.76□□□□□ -0.85
THBS3-210ENST00000541576 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.76□□□□□ -0.85
THBS3-210ENST00000541576 V9GYY5 206 aaPredicted RBP9.76□□□□□ -0.85
THBS3-210ENST00000541576 MSH4O15457 936 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 OSBPP22059 807 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 BAATQ14032 418 aaPredicted RBP9.75□□□□□ -0.85
THBS3-210ENST00000541576 CHADLQ6NUI6 762 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 POTEEQ6S8J3 1075 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 DRC7Q8IY82 874 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 MYRIPQ8NFW9 859 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 TAAR1Q96RJ0 339 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 RMDN3Q96TC7 470 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 BTBD7Q9P203 1132 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 SMC2O95347 1197 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 PLCG1P19174 1290 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 NT5DC1Q5TFE4 455 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 GPAT2Q6NUI2 795 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 PLA2G4DQ86XP0 818 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 SPATA20Q8TB22 786 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 SNX29Q8TEQ0 813 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 SMARCE1Q969G3 411 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 CDK5RAP3Q96JB5 506 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 NUDT12Q9BQG2 462 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 MAN1B1Q9UKM7 699 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 FRMPD4Q14CM0 1322 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 A0A0G2JMZ2 1700 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 ITGBL1O95965 494 aaPredicted RBP9.75□□□□□ -0.85
THBS3-210ENST00000541576 EIF2AK2P19525 551 aaKnown RBP9.75□□□□□ -0.85
THBS3-210ENST00000541576 SETQ01105 290 aaPredicted RBP9.75□□□□□ -0.85
THBS3-210ENST00000541576 CHST13Q8NET6 341 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 IL31RAQ8NI17 732 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 ZFP91Q96JP5 570 aaPredicted RBP9.75□□□□□ -0.85
THBS3-210ENST00000541576 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 MAF1Q9H063 256 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 CUEDC2Q9H467 287 aa9.75□□□□□ -0.85
THBS3-210ENST00000541576 A1CFQ9NQ94 594 aaKnown RBP9.75□□□□□ -0.85
THBS3-210ENST00000541576 MEIS1O00470 390 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 CETPP11597 493 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 GTF2A2P52657 109 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 DPYDQ12882 1025 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
THBS3-210ENST00000541576 ARHGEF16Q5VV41 709 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 PCNX4Q63HM2 1172 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 RIOX2Q8IUF8 465 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 DHX40Q8IX18 779 aaKnown RBP9.74□□□□□ -0.85
THBS3-210ENST00000541576 MXRA8Q9BRK3 442 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 NAT10Q9H0A0 1025 aaKnown RBP9.74□□□□□ -0.85
THBS3-210ENST00000541576 SPATC1LQ9H0A9 340 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 PXMP2Q9NR77 195 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 CYP39A1Q9NYL5 469 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
THBS3-210ENST00000541576 PEX10O60683 326 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 PGM5Q15124 567 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 CST9Q5W186 159 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 PDCD2LQ9BRP1 358 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 BLZF1Q9H2G9 400 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 MAGEF1Q9HAY2 307 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 FBXO40Q9UH90 709 aa9.74□□□□□ -0.85
THBS3-210ENST00000541576 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
THBS3-210ENST00000541576 TERF1P54274 439 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 SPIRE1Q08AE8 756 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 GRB10Q13322 594 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 C16orf45Q96MC5 204 aaPredicted RBP9.73□□□□□ -0.85
THBS3-210ENST00000541576 PURBQ96QR8 312 aaKnown RBP9.73□□□□□ -0.85
THBS3-210ENST00000541576 PNMA3Q9UL41 463 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 CCL15-CCL14A0A0B4J2E2 113 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 ITGB5P18084 799 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 CUL4BQ13620 913 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 MORC3Q14149 939 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 CCL15Q16663 113 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 LRCH2Q5VUJ6 765 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 NCAPG2Q86XI2 1143 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 ANKRD35Q8N283 1001 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 TRIML1Q8N9V2 468 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 NSUN6Q8TEA1 469 aaKnown RBP9.73□□□□□ -0.85
THBS3-210ENST00000541576 SLC5A5Q92911 643 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 MS4A4AQ96JQ5 239 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 PNMA5Q96PV4 448 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 ZNF577Q9BSK1 485 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 KBTBD4Q9NVX7 518 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 VAV3Q9UKW4 847 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 KDM3AQ9Y4C1 1321 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 CNMDO75829 334 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 ZBTB48P10074 688 aaPredicted RBP9.73□□□□□ -0.85
THBS3-210ENST00000541576 ARP10275 920 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 BCRP11274 1271 aa9.73□□□□□ -0.85
THBS3-210ENST00000541576 MYCLP12524 364 aaPredicted RBP9.73□□□□□ -0.85
THBS3-210ENST00000541576 CCT6AP40227 531 aaKnown RBP9.73□□□□□ -0.85
THBS3-210ENST00000541576 HUNKP57058 714 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms