RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 FAM49AQ9H0Q0 323 aaPredicted RBP15.43■□□□□ 0.06
USP3-204ENST00000540797 SNX25Q9H3E2 840 aa15.43■□□□□ 0.06
USP3-204ENST00000540797 CNOT7Q9UIV1 285 aaKnown RBP15.43■□□□□ 0.06
USP3-204ENST00000540797 SERPINA10Q9UK55 444 aa15.43■□□□□ 0.06
USP3-204ENST00000540797 RCOR1Q9UKL0 485 aa15.43■□□□□ 0.06
USP3-204ENST00000540797 GSG1L2A8MUP6 293 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 CRCPO75575 148 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 H2AFZP0C0S5 128 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 ZNF658Q5TYW1 1059 aaPredicted RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 H2AFVQ71UI9 128 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 ATG9AQ7Z3C6 839 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 SMYD4Q8IYR2 804 aaPredicted RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 TBC1D31Q96DN5 1066 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 OATP04181 439 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 PFKFB3Q16875 520 aaPredicted RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 NSUN6Q8TEA1 469 aaKnown RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 RSAD2Q8WXG1 361 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 ABCB11O95342 1321 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 ARL6IP4Q66PJ3 421 aaKnown RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 KIAA1841Q6NSI8 718 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 CPLX4Q7Z7G2 160 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 TRIM58Q8NG06 486 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 AFPP02771 609 aaKnown RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 OSTNP61366 133 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 FKBP3Q00688 224 aaKnown RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 BIRC2Q13490 618 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 BSPRYQ5W0U4 402 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 PDZD4Q76G19 769 aaPredicted RBP15.42■□□□□ 0.06
USP3-204ENST00000540797 GPT2Q8TD30 523 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 NLRP4Q96MN2 994 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 ZMYND15Q9H091 742 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 EMILIN3Q9NT22 766 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 RFX7Q2KHR2 1363 aa15.42■□□□□ 0.06
USP3-204ENST00000540797 GRIN3BO60391 1043 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 RNF8O76064 485 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 SCARF1Q14162 830 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 GIMAP8Q8ND71 665 aaPredicted RBP15.41■□□□□ 0.06
USP3-204ENST00000540797 PRPF38AQ8NAV1 312 aaKnown RBP15.41■□□□□ 0.06
USP3-204ENST00000540797 VPS18Q9P253 973 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 SYNJ2BP-COX16A0A087WUM0 186 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L15C9J2P7 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L13C9JLJ4 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L11C9JVI0 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L18D6R9N7 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L22D6RA61 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L17D6RBQ6 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L19D6RCP7 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L20D6RJB6 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L24Q0WX57 530 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 USP17L6PQ6QN14 398 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 COX16Q9P0S2 106 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 GRM4Q14833 912 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 MAP7D1Q3KQU3 841 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 BHMT2Q9H2M3 363 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 CNTNAP4Q9C0A0 1308 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 BCORL1Q5H9F3 1711 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 MYO3AQ8NEV4 1616 aa15.41■□□□□ 0.06
USP3-204ENST00000540797 IFNB1P01574 187 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 PTPREP23469 700 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 EEF1GP26641 437 aaKnown RBP15.4■□□□□ 0.06
USP3-204ENST00000540797 RESTQ13127 1097 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 C17orf53Q8N3J3 647 aaPredicted RBP15.4■□□□□ 0.06
USP3-204ENST00000540797 GSDMBQ8TAX9 411 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 CALCOCO1Q9P1Z2 691 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 K7ERI5 159 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 BUB1O43683 1085 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 DESI2Q9BSY9 194 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 KIF11P52732 1056 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 PSMD2Q13200 908 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 TCP11Q8WWU5 503 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 NSUN4Q96CB9 384 aaKnown RBP15.4■□□□□ 0.06
USP3-204ENST00000540797 MTA3Q9BTC8 594 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 TECPR2O15040 1411 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 KCNK3O14649 394 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 THAP12O43422 761 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 PPP1R18Q6NYC8 613 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 RSRC2Q7L4I2 434 aaKnown RBP15.4■□□□□ 0.06
USP3-204ENST00000540797 FASTKD5Q7L8L6 764 aaKnown RBP15.4■□□□□ 0.06
USP3-204ENST00000540797 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 FAM167AQ96KS9 214 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 DAGLAQ9Y4D2 1042 aa15.4■□□□□ 0.06
USP3-204ENST00000540797 GOLGA6CA6NDK9 693 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 GOLGA6BA6NDN3 693 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 SH3BP5O60239 455 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 GOLGA6DP0CG33 693 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 AKR1B1P15121 316 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 HOXD10P28358 340 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 SLC15A2Q16348 729 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 TAOK1Q7L7X3 1001 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 MB21D2Q8IYB1 491 aaPredicted RBP15.39■□□□□ 0.05
USP3-204ENST00000540797 LY9Q9HBG7 655 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 GOLGA6AQ9NYA3 693 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 NTSR2O95665 410 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 GNAT1P11488 350 aa15.39■□□□□ 0.05
USP3-204ENST00000540797 TOB2Q14106 344 aaPredicted RBP15.39■□□□□ 0.05
USP3-204ENST00000540797 EZH2Q15910 746 aaKnown RBP15.39■□□□□ 0.05
USP3-204ENST00000540797 CCDC6Q16204 474 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms