RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 MAP3K9P80192 1104 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CC2D2BQ6DHV5 1058 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CDAN1Q8IWY9 1227 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CNKSR1Q969H4 720 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CCDC102AQ96A19 550 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CCDC43Q96MW1 224 aaKnown RBP18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 FGFBP2Q9BYJ0 223 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 BHMT2Q9H2M3 363 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 STK17AQ9UEE5 414 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CDC23Q9UJX2 597 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 PCDHB13Q9Y5F0 798 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 TBCAO75347 108 aaKnown RBP18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 PRPF6O94906 941 aaKnown RBP18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 PBX1P40424 430 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 POLR2FP61218 127 aaKnown RBP18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CCDC93Q567U6 631 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 SH3BP5LQ7L8J4 393 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 HAS1Q92839 578 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 FBXO28Q9NVF7 368 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 STK32BQ9NY57 414 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 TCEAL9Q9UHQ7 104 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 DNM3Q9UQ16 869 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 CCDC88AQ3V6T2 1871 aa18.94■□□□□ 0.62
EPB41L3-204ENST00000540638 PSMC6P62333 389 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 KRT83P78385 493 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 DACT2Q5SW24 774 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 TMEM179Q6ZVK1 233 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 GCNT3O95395 438 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 GYS2P54840 703 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 ERMNQ8TAM6 284 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 MTMR9Q96QG7 549 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 IFIH1Q9BYX4 1025 aaKnown RBP18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 ZNF446Q9NWS9 450 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 EPHB6O15197 1021 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 SP4Q02446 784 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 VWA3BQ502W6 1294 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 TMEM39BQ9GZU3 492 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 LACRTQ9GZZ8 138 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 SUGCTQ9HAC7 445 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 SEPT11Q9NVA2 429 aaKnown RBP18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 MYO6Q9UM54 1294 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 BCS1LQ9Y276 419 aa18.93■□□□□ 0.62
EPB41L3-204ENST00000540638 RXRBP28702 533 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 ADAM9Q13443 819 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 CCDC181Q5TID7 509 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 LSM14BQ9BX40 385 aaKnown RBP18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 SORBS3O60504 671 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 MED24O75448 989 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 MYL1P05976 194 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 PNMA6AP0CW24 399 aaPredicted RBP18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 EIF4A3P38919 411 aaKnown RBP18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 JAG1P78504 1218 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 SRGAP1Q7Z6B7 1085 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 CEP112Q8N8E3 955 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 SPAG5Q96R06 1193 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 ESYT2A0FGR8 921 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 LRRC53A6NM62 1247 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 USO1O60763 962 aaKnown RBP18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 MLXIPQ9HAP2 919 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 SUGT1Q9Y2Z0 365 aa18.92■□□□□ 0.62
EPB41L3-204ENST00000540638 SCN7AQ01118 1682 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 ZNF185O15231 689 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 PDE4CQ08493 712 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 LRRC27Q9C0I9 530 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 BCAS3Q9H6U6 928 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 MAGEF1Q9HAY2 307 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 ARHGEF10LQ9HCE6 1279 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 EMILIN3Q9NT22 766 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 HDAC9Q9UKV0 1011 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 ATP1A1P05023 1023 aaKnown RBP18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 DNAAF5Q86Y56 855 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 KSR1Q8IVT5 923 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 NT5C3AQ9H0P0 336 aa18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 COL5A3P25940 1745 aaPredicted RBP18.91■□□□□ 0.62
EPB41L3-204ENST00000540638 A0A1W2PRG0 241 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 LRRC10BA6NIK2 292 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 NR2F2P24468 414 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 MAGEA1P43355 309 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 RASSF7Q02833 373 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 CAPN11Q9UMQ6 739 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 WNK3Q9BYP7 1800 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 RSPH10B2B2RC85 870 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 hCG_1984214I3L0E3 225 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 ZBTB39O15060 712 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 MOCS3O95396 460 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 RSPH10BP0C881 870 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 FXR2P51116 673 aaKnown RBP eCLIP18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 STAT2P52630 851 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 ZBED6P86452 979 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 MAN2A1Q16706 1144 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 HAUS3Q68CZ6 603 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 DEFB132Q7Z7B7 95 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 ZNF713Q8N859 430 aaPredicted RBP18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 KCND1Q9NSA2 647 aa18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 SF3B2Q13435 895 aaKnown RBP18.9■□□□□ 0.62
EPB41L3-204ENST00000540638 PRKG1Q13976 671 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms