RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
HMGA2-209ENST00000539662 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
HMGA2-209ENST00000539662 ELP1O95163 1332 aa12.29□□□□□ -0.44
HMGA2-209ENST00000539662 SCN10AQ9Y5Y9 1956 aa12.29□□□□□ -0.44
HMGA2-209ENST00000539662 TRIOBPQ9H2D6 2365 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 ARVCFO00192 962 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 NKRFO15226 690 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGA2-209ENST00000539662 GGPS1O95749 300 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 FDPSP14324 419 aaKnown RBP12.28□□□□□ -0.44
HMGA2-209ENST00000539662 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
HMGA2-209ENST00000539662 ITGA7Q13683 1181 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 NPY5RQ15761 445 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 HSDL1Q3SXM5 330 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 CELF3Q5SZQ8 465 aaKnown RBP12.28□□□□□ -0.44
HMGA2-209ENST00000539662 ANKRD33Q7Z3H0 272 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 SLC43A3Q8NBI5 491 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 GDF15Q99988 308 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 ANO3Q9BYT9 981 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 ZMYND12Q9H0C1 365 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 TRPV6Q9H1D0 765 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 SLKQ9H2G2 1235 aaPredicted RBP12.28□□□□□ -0.44
HMGA2-209ENST00000539662 UBIAD1Q9Y5Z9 338 aa12.28□□□□□ -0.44
HMGA2-209ENST00000539662 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.45
HMGA2-209ENST00000539662 SPDYE3A6NKU9 549 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 JAK2O60674 1132 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 ZNF286BP0CG31 522 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 ICAM3P32942 547 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 CPT1AP50416 773 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 CHMP4BP1P59074 171 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 NBPF20Q3BBV1 942 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 CYFIP1Q7L576 1253 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.45
HMGA2-209ENST00000539662 CRYGNQ8WXF5 182 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 KCNJ14Q9UNX9 436 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 UMODL1Q5DID0 1318 aa12.27□□□□□ -0.45
HMGA2-209ENST00000539662 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 CPLX1O14810 134 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 B4GALT4O60513 344 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 CD4P01730 458 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 CLTBP09497 229 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 ARP10275 920 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 KCNA2P16389 499 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
HMGA2-209ENST00000539662 AKAP17AQ02040 695 aaKnown RBP12.26□□□□□ -0.45
HMGA2-209ENST00000539662 SP4Q02446 784 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 HIC1Q14526 733 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 ZNF713Q8N859 430 aaPredicted RBP12.26□□□□□ -0.45
HMGA2-209ENST00000539662 BADQ92934 168 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 GTF3C6Q969F1 213 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 EMID1Q96A84 441 aaPredicted RBP12.26□□□□□ -0.45
HMGA2-209ENST00000539662 SPATA33Q96N06 139 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 MTG1Q9BT17 334 aaPredicted RBP12.26□□□□□ -0.45
HMGA2-209ENST00000539662 TRMT13Q9NUP7 481 aaKnown RBP12.26□□□□□ -0.45
HMGA2-209ENST00000539662 POLR3EQ9NVU0 708 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 TBX21Q9UL17 535 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 LAMA3Q16787 3333 aa12.26□□□□□ -0.45
HMGA2-209ENST00000539662 FAM86B1E9PN63 330 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 FIBPO43427 364 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 ZEB2O60315 1214 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
HMGA2-209ENST00000539662 DEXIO95424 95 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 FAM86B2P0C5J1 330 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 SREBF1P36956 1147 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 FOSBP53539 338 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 EPHB4P54760 987 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 LAMC2Q13753 1193 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 HABP4Q5JVS0 413 aaKnown RBP12.25□□□□□ -0.45
HMGA2-209ENST00000539662 NSUN7Q8NE18 718 aaKnown RBP12.25□□□□□ -0.45
HMGA2-209ENST00000539662 PPTC7Q8NI37 304 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 TOX2Q96NM4 488 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 CTAGE1Q96RT6 745 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 MXRA8Q9BRK3 442 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 C6orf50Q9HD87 102 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 JADE2Q9NQC1 790 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 TMEM39AQ9NV64 488 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
HMGA2-209ENST00000539662 DCDC2CA8MYV0 355 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 M0R2N6 131 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 STAM2O75886 525 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 CABYRO75952 493 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 TGFB3P10600 412 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 CYP2C9P11712 490 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 HOXD8P13378 290 aaPredicted RBP12.24□□□□□ -0.45
HMGA2-209ENST00000539662 ARHGAP4P98171 946 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 ZNF200P98182 395 aaPredicted RBP12.24□□□□□ -0.45
HMGA2-209ENST00000539662 ITGB3BPQ13352 177 aaPredicted RBP12.24□□□□□ -0.45
HMGA2-209ENST00000539662 AP3B2Q13367 1082 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 TRIP12Q14669 1992 aaPredicted RBP12.24□□□□□ -0.45
HMGA2-209ENST00000539662 ANKRD1Q15327 319 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 GNPTABQ3T906 1256 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 FAM47CQ5HY64 1035 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 XRRA1Q6P2D8 792 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 KCNV1Q6PIU1 500 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 TRIM50Q86XT4 487 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 TRIM22Q8IYM9 498 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
HMGA2-209ENST00000539662 OXER1Q8TDS5 423 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms