RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 IKQ13123 557 aaPredicted RBP27.65■■■□□ 2.02
RAB40C-204ENST00000538492 TERF2Q15554 542 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 P2RX7Q99572 595 aaKnown RBP27.65■■■□□ 2.02
RAB40C-204ENST00000538492 NT5C3AQ9H0P0 336 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 F5H6K3 240 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 MEIS2O14770 477 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 KRT86O43790 486 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 TAL1P17542 331 aaPredicted RBP27.65■■■□□ 2.02
RAB40C-204ENST00000538492 KLRC3Q07444 240 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 CCDC170Q8IYT3 715 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 TSG101Q99816 390 aa27.65■■■□□ 2.02
RAB40C-204ENST00000538492 EIF3CLB5ME19 914 aaKnown RBP27.64■■■□□ 2.02
RAB40C-204ENST00000538492 ATP1A1P05023 1023 aaKnown RBP27.64■■■□□ 2.02
RAB40C-204ENST00000538492 FAM26FQ5R3K3 315 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 TATDN1Q6P1N9 297 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 CCDC155Q8N6L0 562 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 EIF3CQ99613 913 aaKnown RBP27.64■■■□□ 2.02
RAB40C-204ENST00000538492 TDRD3Q9H7E2 651 aaKnown RBP27.64■■■□□ 2.02
RAB40C-204ENST00000538492 KDM3AQ9Y4C1 1321 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 SLX4Q8IY92 1834 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 KRT26Q7Z3Y9 468 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 CCDC42Q96M95 316 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 GLT8D2Q9H1C3 349 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 KCNMB3Q9NPA1 279 aa27.64■■■□□ 2.02
RAB40C-204ENST00000538492 BMP2KQ9NSY1 1161 aaPredicted RBP27.64■■■□□ 2.02
RAB40C-204ENST00000538492 CCDC151A5D8V7 595 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 PLA2G4BP0C869 781 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 CHRNA5P30532 468 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 USP11P51784 963 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 AOC3Q16853 763 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 ABCB5Q2M3G0 1257 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 ZNF771Q7L3S4 317 aaPredicted RBP27.63■■■□□ 2.01
RAB40C-204ENST00000538492 NAP1L4Q99733 375 aaKnown RBP27.63■■■□□ 2.01
RAB40C-204ENST00000538492 MRIQ9BWK5 157 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 TANGO6Q9C0B7 1094 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 H0YIN7 160 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 PLSCR1O15162 318 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 HMGB2P26583 209 aaKnown RBP27.63■■■□□ 2.01
RAB40C-204ENST00000538492 HYIQ5T013 277 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 TMEM179Q6ZVK1 233 aa27.63■■■□□ 2.01
RAB40C-204ENST00000538492 NOA1Q8NC60 698 aaKnown RBP27.63■■■□□ 2.01
RAB40C-204ENST00000538492 ZNF263O14978 683 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 SRGAP2O75044 1071 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 JAG1P78504 1218 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 LONRF2Q1L5Z9 754 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 PRR16Q569H4 304 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 TRAPPC11Q7Z392 1133 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 GPBP1Q86WP2 473 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 NELFCDQ8IXH7 590 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 PLAGL2Q9UPG8 496 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 MACROD2A1Z1Q3 448 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 TRAF5O00463 557 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 ATP8B1O43520 1251 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 FUT8Q9BYC5 575 aa27.62■■■□□ 2.01
RAB40C-204ENST00000538492 MED24O75448 989 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 NDUFB10O96000 172 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 ARHGAP4P98171 946 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 BRD3Q15059 726 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 AMNQ9BXJ7 453 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 ARHGAP20Q9P2F6 1191 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 POTEFA5A3E0 1075 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 POTEIP0CG38 1075 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 HDLBPQ00341 1268 aaKnown RBP27.61■■■□□ 2.01
RAB40C-204ENST00000538492 POTEGQ6S5H5 508 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 POTEEQ6S8J3 1075 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 CCDC84Q86UT8 332 aaPredicted RBP27.61■■■□□ 2.01
RAB40C-204ENST00000538492 MSANTD4Q8NCY6 345 aa27.61■■■□□ 2.01
RAB40C-204ENST00000538492 CDK17Q00537 523 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 ZCWPW2Q504Y3 356 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 RRAGAQ7L523 313 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 FLAD1Q8NFF5 587 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 ZHX3Q9H4I2 956 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 SERPINA10Q9UK55 444 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 ABCB11O95342 1321 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 GH2P01242 217 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 SPA17Q15506 151 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 HERC4Q5GLZ8 1057 aaPredicted RBP27.6■■■□□ 2.01
RAB40C-204ENST00000538492 ZNF662Q6ZS27 426 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 SMCR8Q8TEV9 937 aaPredicted RBP27.6■■■□□ 2.01
RAB40C-204ENST00000538492 SAR1BQ9Y6B6 198 aa27.6■■■□□ 2.01
RAB40C-204ENST00000538492 CYP3A7-CYP3A51PA0A087WV96 503 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 LRRC53A6NM62 1247 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 CYP3A7P24462 503 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 FKBP3Q00688 224 aaKnown RBP27.59■■■□□ 2.01
RAB40C-204ENST00000538492 CCDC65Q8IXS2 484 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 EHBP1Q8NDI1 1231 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 COL4A3BPQ9Y5P4 624 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 FKBP1AP62942 108 aaKnown RBP27.59■■■□□ 2.01
RAB40C-204ENST00000538492 KIF5AQ12840 1032 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 CCDC40Q4G0X9 1142 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 FBXO11Q86XK2 927 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 SPICE1Q8N0Z3 855 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 IQCDQ96DY2 449 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 CAPZA3Q96KX2 299 aa27.59■■■□□ 2.01
RAB40C-204ENST00000538492 POTEB2H3BUK9 544 aa27.58■■■□□ 2.01
RAB40C-204ENST00000538492 POLR3GO15318 223 aaPredicted RBP27.58■■■□□ 2.01
RAB40C-204ENST00000538492 KRT18P05783 430 aaKnown RBP27.58■■■□□ 2.01
RAB40C-204ENST00000538492 CYP11B2P19099 503 aa27.58■■■□□ 2.01
RAB40C-204ENST00000538492 HNRNPH3P31942 346 aaKnown RBP27.58■■■□□ 2.01
RAB40C-204ENST00000538492 VAV2P52735 878 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms