RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 DDX41Q9UJV9 622 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PRR12Q9ULL5 1215 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 TMX2Q9Y320 296 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 REXO2Q9Y3B8 237 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 POTEB3A0JP26 581 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 SPDYE3A6NKU9 549 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 POTECB2RU33 542 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 NKRFO15226 690 aaKnown RBP eCLIP12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PPP2R3AQ06190 1150 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 TRAF1Q13077 416 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 MAN2A1Q16706 1144 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 VWA3BQ502W6 1294 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PRR16Q569H4 304 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 ZNF569Q5MCW4 686 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 FAM26FQ5R3K3 315 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 FKBP1CQ5VVH2 108 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 POTEBQ6S5H4 581 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 TSG101Q99816 390 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 AGPAT5Q9NUQ2 364 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PCDHA2Q9Y5H9 948 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 MED24O75448 989 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 RAD17O75943 681 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 CYP3A4P08684 503 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 CYP11B2P19099 503 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 KLK7P49862 253 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 CDK17Q00537 523 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 LRRC41Q15345 812 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 HAUS3Q68CZ6 603 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 ZNF662Q6ZS27 426 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 GLIS3Q8NEA6 775 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 NDST4Q9H3R1 872 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 OGFRQ9NZT2 677 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 PITPNM2Q9BZ72 1349 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 FRMD3A2A2Y4 597 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 FAM86B1E9PN63 330 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 TBC1D12O60347 775 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 ABL1P00519 1130 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 FAM86B2P0C5J1 330 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 STAT3P40763 770 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 ECE1P42892 770 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 STAT2P52630 851 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 SLC12A3P55017 1021 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 KIAA1755Q5JYT7 1200 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 RSRC2Q7L4I2 434 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 GPBP1Q86WP2 473 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 SPICE1Q8N0Z3 855 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 SLC35F6Q8N357 371 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 OGFOD1Q8N543 542 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 ACER1Q8TDN7 264 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 ZNHIT6Q9NWK9 470 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 ZBTB21Q9ULJ3 1066 aa12.69□□□□□ -0.38
SLC28A1-204ENST00000538177 CTAGE9A4FU28 777 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 KCNA3P22001 575 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 RPA1P27694 616 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 HNRNPH3P31942 346 aaKnown RBP12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 FKBP3Q00688 224 aaKnown RBP12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 CCDC84Q86UT8 332 aaPredicted RBP12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 CCDC170Q8IYT3 715 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 ERMNQ8TAM6 284 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 HAUS4Q9H6D7 363 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 ZNF277Q9NRM2 450 aaPredicted RBP12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 CDC23Q9UJX2 597 aa12.68□□□□□ -0.38
SLC28A1-204ENST00000538177 PLA2G6O60733 806 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 SPATA31C1P0DKV0 1188 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 KRT83P78385 493 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 ARSHQ5FYA8 562 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 CEP63Q96MT8 703 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 MSH4O15457 936 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 TAL1P17542 331 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 CYLC1P35663 651 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 HERVK_113P62684 666 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 FAM83BQ5T0W9 1011 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 AGBL3Q8NEM8 1001 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 CHURC1Q8WUH1 139 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 RGS17Q9UGC6 210 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 VAV3Q9UKW4 847 aa12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-204ENST00000538177 COL4A5P29400 1685 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms