RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SPIRE1Q08AE8 756 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 Q4G0T1 1027 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 NBPF12Q5TAG4 269 aaPredicted RBP19.48■□□□□ 0.71
SNX17-210ENST00000537606 MOXD1Q6UVY6 613 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 ANKRD7Q92527 254 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 AGBL1Q96MI9 1066 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 SGIP1Q9BQI5 828 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 DEFB129Q9H1M3 183 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 TBC1D7Q9P0N9 293 aa19.48■□□□□ 0.71
SNX17-210ENST00000537606 BRCA1P38398 1863 aaKnown RBP19.48■□□□□ 0.71
SNX17-210ENST00000537606 GCOM1H8Y6P7 765 aaPredicted RBP19.47■□□□□ 0.71
SNX17-210ENST00000537606 KIF2AO00139 706 aaPredicted RBP19.47■□□□□ 0.71
SNX17-210ENST00000537606 POLR2MP0CAP2 368 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 LDHDQ86WU2 507 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 CATSPER3Q86XQ3 398 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 LRRN4CLQ8ND94 238 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 THAP9Q9H5L6 903 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 PVALEFA0A1B0GWK0 134 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 PIK3CDO00329 1044 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 PLA2G4BP0C869 781 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 PSMC6P62333 389 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 ETF1P62495 437 aaKnown RBP19.47■□□□□ 0.71
SNX17-210ENST00000537606 TNFAIP1Q13829 316 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 DNAJC19Q96DA6 116 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 NT5C3AQ9H0P0 336 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 MAGEC2Q9UBF1 373 aaPredicted RBP19.47■□□□□ 0.71
SNX17-210ENST00000537606 FEM1BQ9UK73 627 aa19.47■□□□□ 0.71
SNX17-210ENST00000537606 RPS12P25398 132 aaKnown RBP19.46■□□□□ 0.71
SNX17-210ENST00000537606 CYP4A11Q02928 519 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 SEMA3FQ13275 785 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 HYIQ5T013 277 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 MCTP2Q6DN12 878 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 MAP7D2Q96T17 732 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 CD2APQ9Y5K6 639 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 ERCC3P19447 782 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 FAM160B2Q86V87 743 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 CPXCR1Q8N123 301 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 ZNF541Q9H0D2 1346 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 KDM3AQ9Y4C1 1321 aa19.46■□□□□ 0.71
SNX17-210ENST00000537606 A0A0U1RQJ8 604 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 BICDL2A1A5D9 508 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 MFAP3LO75121 409 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 CIITAP33076 1130 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 KIF4BQ2VIQ3 1234 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 ATRIPQ8WXE1 791 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 WDR18Q9BV38 432 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 FGFBP2Q9BYJ0 223 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 PANK4Q9NVE7 773 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 B4DLN1 442 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 FZD9O00144 591 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 EEF1GP26641 437 aaKnown RBP19.45■□□□□ 0.7
SNX17-210ENST00000537606 COASYQ13057 564 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 RAD9BQ6WBX8 426 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 GPBP1Q86WP2 473 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 CNOT6LQ96LI5 555 aaKnown RBP19.45■□□□□ 0.7
SNX17-210ENST00000537606 TUBGCP2Q9BSJ2 902 aa19.45■□□□□ 0.7
SNX17-210ENST00000537606 MRPL11Q9Y3B7 192 aaKnown RBP19.45■□□□□ 0.7
SNX17-210ENST00000537606 IGLV3-22A0A075B6J6 115 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 EML1O00423 815 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 ZSCAN12O43309 604 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 SPATA31C1P0DKV0 1188 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 PTGER2P43116 358 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 PDCL2Q8N4E4 241 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 MB21D1Q8N884 522 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 ZHX3Q9H4I2 956 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 POLD4Q9HCU8 107 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 CCPG1Q9ULG6 757 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 TBX3O15119 743 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 CCP110O43303 1012 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 CYP3A4P08684 503 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 PABPC4Q13310 644 aaKnown RBP eCLIP19.44■□□□□ 0.79e-12■■■■□ 23.3
SNX17-210ENST00000537606 CENPPQ6IPU0 288 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 FAM20AQ96MK3 541 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 PANX2Q96RD6 677 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 LRRC27Q9C0I9 530 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 MRPL44Q9H9J2 332 aaKnown RBP19.44■□□□□ 0.7
SNX17-210ENST00000537606 BMP2KQ9NSY1 1161 aaPredicted RBP19.44■□□□□ 0.7
SNX17-210ENST00000537606 RGL1Q9NZL6 768 aa19.44■□□□□ 0.7
SNX17-210ENST00000537606 LGALS16A8MUM7 142 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 CHMP2AO43633 222 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 EHHADHQ08426 723 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 MTERF4Q7Z6M4 381 aaKnown RBP19.43■□□□□ 0.7
SNX17-210ENST00000537606 TANGO6Q9C0B7 1094 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 HOMER2Q9NSB8 354 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 VAV3Q9UKW4 847 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNX17-210ENST00000537606 ZNF536O15090 1300 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 ITIH6Q6UXX5 1313 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 PLA2G6O60733 806 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 SLU7O95391 586 aaKnown RBP19.43■□□□□ 0.7
SNX17-210ENST00000537606 CYP11B2P19099 503 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 MTIF2P46199 727 aaKnown RBP19.43■□□□□ 0.7
SNX17-210ENST00000537606 TRAF1Q13077 416 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 MTMR2Q13614 643 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 ARSHQ5FYA8 562 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 HAUS3Q68CZ6 603 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 ZKSCAN4Q969J2 545 aaPredicted RBP19.43■□□□□ 0.7
SNX17-210ENST00000537606 HOOK2Q96ED9 719 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 WDR24Q96S15 920 aa19.43■□□□□ 0.7
SNX17-210ENST00000537606 L2HGDHQ9H9P8 463 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms