RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 TMEM145Q8NBT3 493 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 MYRFQ9Y2G1 1151 aa7.65□□□□□ -1.18
VBP1-203ENST00000535916 NKX3-2P78367 333 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 KIAA2012Q0VF49 1180 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 LGI4Q8N135 537 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 ARRDC4Q8NCT1 418 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 C1orf159Q96HA4 380 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 CHAMP1Q96JM3 812 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 CCDC140Q96MF4 163 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 ZSWIM3Q96MP5 696 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 NGRNQ9NPE2 291 aaKnown RBP7.64□□□□□ -1.19
VBP1-203ENST00000535916 PCDHB4Q9Y5E5 795 aa7.64□□□□□ -1.19
VBP1-203ENST00000535916 TCRBV5S2A0A599 114 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 H7BY64 318 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 HGSO14964 777 aaPredicted RBP7.63□□□□□ -1.19
VBP1-203ENST00000535916 ERCC5P28715 1186 aaPredicted RBP7.63□□□□□ -1.19
VBP1-203ENST00000535916 LSAMPQ13449 338 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 CHRNA2Q15822 529 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 FXNQ16595 210 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 STEAP3Q658P3 488 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 BORAQ6PGQ7 559 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 VPS37DQ86XT2 251 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 LOXL4Q96JB6 756 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 KRTAP3-1Q9BYR8 98 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 TMPRSS5Q9H3S3 457 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 CLDND1Q9NY35 253 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 DTLQ9NZJ0 730 aa7.63□□□□□ -1.19
VBP1-203ENST00000535916 TADA3O75528 432 aa7.62□□□□□ -1.19
VBP1-203ENST00000535916 ZNF28P17035 718 aa7.62□□□□□ -1.19
VBP1-203ENST00000535916 EMC4Q5J8M3 183 aa7.62□□□□□ -1.19
VBP1-203ENST00000535916 FAM124AQ86V42 546 aa7.62□□□□□ -1.19
VBP1-203ENST00000535916 TOE1Q96GM8 510 aaKnown RBP7.62□□□□□ -1.19
VBP1-203ENST00000535916 C8orf49Q96NF6 230 aa7.62□□□□□ -1.19
VBP1-203ENST00000535916 GJB6O95452 261 aa7.61□□□□□ -1.19
VBP1-203ENST00000535916 CAPNS1P04632 268 aa7.61□□□□□ -1.19
VBP1-203ENST00000535916 GRIA2P42262 883 aa7.61□□□□□ -1.19
VBP1-203ENST00000535916 SLC35F1Q5T1Q4 408 aa7.61□□□□□ -1.19
VBP1-203ENST00000535916 PRAMEF18Q5VWM3 479 aa7.61□□□□□ -1.19
VBP1-203ENST00000535916 TEPPQ6URK8 271 aa7.61□□□□□ -1.19
VBP1-203ENST00000535916 LCORQ96JN0 433 aaPredicted RBP7.61□□□□□ -1.19
VBP1-203ENST00000535916 SAMD11Q96NU1 681 aa7.61□□□□□ -1.19
VBP1-203ENST00000535916 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
VBP1-203ENST00000535916 ZNF536O15090 1300 aa7.6□□□□□ -1.19
VBP1-203ENST00000535916 B4GALT3O60512 393 aa7.6□□□□□ -1.19
VBP1-203ENST00000535916 DGKIO75912 1065 aa7.6□□□□□ -1.19
VBP1-203ENST00000535916 SLC10A6Q3KNW5 377 aa7.6□□□□□ -1.19
VBP1-203ENST00000535916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.6□□□□□ -1.19
VBP1-203ENST00000535916 SSBP3Q9BWW4 388 aaPredicted RBP7.6□□□□□ -1.19
VBP1-203ENST00000535916 C9orf118A6NHY6 69 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 LRG1P02750 347 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 FGRP09769 529 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 IL13P35225 146 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 CPZQ66K79 652 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 EEPD1Q7L9B9 569 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 LIMS2Q7Z4I7 341 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 TTC9BQ8N6N2 239 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 CLIC6Q96NY7 704 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 EPB41L1Q9H4G0 881 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 ZNF408Q9H9D4 720 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 MYOTQ9UBF9 498 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 WASF3Q9UPY6 502 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 NPFFR2Q9Y5X5 522 aa7.59□□□□□ -1.19
VBP1-203ENST00000535916 CYP1A1P04798 512 aaPredicted RBP7.58□□□□□ -1.2
VBP1-203ENST00000535916 ZNF20P17024 532 aa7.58□□□□□ -1.2
VBP1-203ENST00000535916 MLLT6P55198 1093 aaPredicted RBP7.58□□□□□ -1.2
VBP1-203ENST00000535916 PPP2R2AP63151 447 aa7.58□□□□□ -1.2
VBP1-203ENST00000535916 HOMEZQ8IX15 550 aa7.58□□□□□ -1.2
VBP1-203ENST00000535916 ZCCHC14Q8WYQ9 949 aaKnown RBP7.58□□□□□ -1.2
VBP1-203ENST00000535916 YTHDC1Q96MU7 727 aaKnown RBP7.58□□□□□ -1.2
VBP1-203ENST00000535916 CDIP1Q9H305 208 aa7.58□□□□□ -1.2
VBP1-203ENST00000535916 L2HGDHQ9H9P8 463 aa7.58□□□□□ -1.2
VBP1-203ENST00000535916 CROTQ9UKG9 612 aa7.58□□□□□ -1.2
VBP1-203ENST00000535916 TNFRSF1AP19438 455 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 GNL2Q13823 731 aaKnown RBP7.57□□□□□ -1.2
VBP1-203ENST00000535916 GLB1LQ6UWU2 654 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 TMC5Q6UXY8 1006 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 KCTD13Q8WZ19 329 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 MBD6Q96DN6 1003 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 IER2Q9BTL4 223 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 EPN3Q9H201 632 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 RBPJLQ9UBG7 517 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 ST6GALNAC2Q9UJ37 374 aa7.57□□□□□ -1.2
VBP1-203ENST00000535916 A0A1W2PQU0 124 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 MATN3O15232 486 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 LAMTOR5O43504 91 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 MSCO60682 206 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 MAP4K2Q12851 820 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 CELF2-AS1Q8N7Q2 184 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 HNRNPLLQ8WVV9 542 aaKnown RBP7.56□□□□□ -1.2
VBP1-203ENST00000535916 TMEM209Q96SK2 561 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 JAM3Q9BX67 310 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 C1QTNF3Q9BXJ4 246 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 TMEM168Q9H0V1 697 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 SMOC1Q9H4F8 434 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 PPP4R1LQ9P1A2 415 aa7.56□□□□□ -1.2
VBP1-203ENST00000535916 PPARGC1AQ9UBK2 798 aaKnown RBP7.56□□□□□ -1.2
VBP1-203ENST00000535916 AGRPO00253 132 aa7.55□□□□□ -1.2
VBP1-203ENST00000535916 MCF2L2Q86YR7 1114 aa7.55□□□□□ -1.2
VBP1-203ENST00000535916 CHST13Q8NET6 341 aa7.55□□□□□ -1.2
VBP1-203ENST00000535916 PIP4K2CQ8TBX8 421 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms