RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 FAM83BQ5T0W9 1011 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 ZNF473Q8WTR7 871 aaKnown RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 CDK5RAP3Q96JB5 506 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 PNMA5Q96PV4 448 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 LSM14BQ9BX40 385 aaKnown RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 ATP8A2Q9NTI2 1148 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 PLCH1Q4KWH8 1693 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 NPHP3-ACAD11A0A0J9YXS1 232 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 KCNK3O14649 394 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 MEFVO15553 781 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 NOL4O94818 638 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 MYL1P05976 194 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 EPB41P11171 864 aaKnown RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 CCDC40Q4G0X9 1142 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 LRRC55Q6ZSA7 311 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 ZNF572Q7Z3I7 529 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 NEK8Q86SG6 692 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 ZNF444Q8N0Y2 327 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 NCAPGQ9BPX3 1015 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-214ENST00000535493 FRMPD2Q68DX3 1309 aaPredicted RBP14.77□□□□□ -0.04
HDAC4-214ENST00000535493 PPP1R37O75864 691 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 ACTN1P12814 892 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 FLT3P36888 993 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 FNTAP49354 379 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 EIF6P56537 245 aaKnown RBP14.77□□□□□ -0.04
HDAC4-214ENST00000535493 AMPD3Q01432 767 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 C12orf60Q5U649 245 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 CCDC84Q86UT8 332 aaPredicted RBP14.77□□□□□ -0.04
HDAC4-214ENST00000535493 LARP4BQ92615 738 aaKnown RBP14.77□□□□□ -0.04
HDAC4-214ENST00000535493 EPN3Q9H201 632 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 GDF3Q9NR23 364 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 SH3GLB2Q9NR46 395 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 SLAIN2Q9P270 581 aa14.77□□□□□ -0.04
HDAC4-214ENST00000535493 DCDC2CA8MYV0 355 aa14.77□□□□□ -0.05
HDAC4-214ENST00000535493 LCA5LO95447 670 aa14.77□□□□□ -0.05
HDAC4-214ENST00000535493 DGKHQ86XP1 1220 aa14.77□□□□□ -0.05
HDAC4-214ENST00000535493 ZHX3Q9H4I2 956 aa14.77□□□□□ -0.05
HDAC4-214ENST00000535493 BSDC1Q9NW68 430 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-214ENST00000535493 PCP11498 1178 aaKnown RBP14.76□□□□□ -0.05
HDAC4-214ENST00000535493 ITIH3Q06033 890 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 PTGISQ16647 500 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 FBXO33Q7Z6M2 555 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 NLRP14Q86W24 1093 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 CLEC10AQ8IUN9 316 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 MYCBPAPQ8TBZ2 947 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 NEUROG2Q9H2A3 272 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 LRP5O75197 1615 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 LOC102724428A0A0B4J2F2 783 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 SIK1P57059 783 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 ACTN3Q08043 901 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-214ENST00000535493 PAK2Q13177 524 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 SF3B2Q13435 895 aaKnown RBP14.76□□□□□ -0.05
HDAC4-214ENST00000535493 CALCRLQ16602 461 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 SLC9C1Q4G0N8 1177 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 PARP10Q53GL7 1025 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 SFMBT2Q5VUG0 894 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 SNX29Q8TEQ0 813 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 ZMYND12Q9H0C1 365 aa14.76□□□□□ -0.05
HDAC4-214ENST00000535493 PRPHP41219 470 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 QPCTQ16769 361 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 PRPF38AQ8NAV1 312 aaKnown RBP14.75□□□□□ -0.05
HDAC4-214ENST00000535493 ATP6V1G3Q96LB4 118 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 DDX47Q9H0S4 455 aaKnown RBP14.75□□□□□ -0.05
HDAC4-214ENST00000535493 GRID2IPA4D2P6 1211 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-214ENST00000535493 PJA2O43164 708 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 MDH1P40925 334 aaKnown RBP14.75□□□□□ -0.05
HDAC4-214ENST00000535493 ODF2Q5BJF6 829 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 KDM7AQ6ZMT4 941 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 UNC13DQ70J99 1090 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 B4GALNT4Q76KP1 1039 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 CNPY4Q8N129 248 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 AK8Q96MA6 479 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 MYCBPQ99417 103 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-214ENST00000535493 TRIM31Q9BZY9 425 aa14.75□□□□□ -0.05
HDAC4-214ENST00000535493 CEP104O60308 925 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 ITGB3BPQ13352 177 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-214ENST00000535493 SOGA3Q5TF21 947 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 ADAT2Q7Z6V5 191 aaKnown RBP14.74□□□□□ -0.05
HDAC4-214ENST00000535493 CUEDC2Q9H467 287 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 GEMIN8Q9NWZ8 242 aaKnown RBP14.74□□□□□ -0.05
HDAC4-214ENST00000535493 ARAP2Q8WZ64 1704 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 LAD1O00515 517 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 EDIL3O43854 480 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 ITGA4P13612 1032 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 HSD17B3P37058 310 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 KLHL30Q0D2K2 578 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 UBE2SQ16763 222 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 REXO1Q8N1G1 1221 aaKnown RBP14.74□□□□□ -0.05
HDAC4-214ENST00000535493 CABS1Q96KC9 395 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 INPP4AQ96PE3 977 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-214ENST00000535493 YY1AP1Q9H869 796 aa14.74□□□□□ -0.05
HDAC4-214ENST00000535493 TNNI2P48788 182 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 NAB2Q15742 525 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 UAP1Q16222 522 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-214ENST00000535493 CDC37Q16543 378 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms