RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TMEM59LQ9UK28 342 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 PTCH2Q9Y6C5 1203 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 TAF6LQ9Y6J9 622 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 LRRIQ1Q96JM4 1722 aa3.77□□□□□ -1.81
CSDE1-216ENST00000534389 DISP3Q9P2K9 1392 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 RAD50Q92878 1312 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 GRIN2BQ13224 1484 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 COL17A1Q9UMD9 1497 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ESYT3A0FGR9 886 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 RBAK-RBAKDNI3L0D1 243 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 APAF1O14727 1248 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 AURKAO14965 403 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 TBX1O43435 398 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 HYAL3O43820 417 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ZNF205O95201 554 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ASMTLO95671 621 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ESR1P03372 595 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 PABPC1P11940 636 aaKnown RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 PLS3P13797 630 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 CASQ1P31415 396 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 RTP1P59025 263 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 CHRNEQ04844 493 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 TCEA2Q15560 299 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 PRSS53Q2L4Q9 553 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 MUM1L1Q5H9M0 696 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 TMEM67Q5HYA8 995 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ARTNQ5T4W7 220 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 IQCEQ6IPM2 695 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 SDE2Q6IQ49 451 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 GIMAP6Q6P9H5 292 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 SLC23A3Q6PIS1 610 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 SYT10Q6XYQ8 523 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 FAM43BQ6ZT52 329 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 MTDHQ86UE4 582 aaKnown RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 CABP7Q86V35 215 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 LILRB2Q8N423 598 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ZGPATQ8N5A5 531 aaKnown RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 DIO2Q92813 273 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 FCRL2Q96LA5 508 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 PTCHD1Q96NR3 888 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 FCRL3Q96P31 734 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 TESK2Q96S53 571 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 MYCBPQ99417 103 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 SLC12A9Q9BXP2 914 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ADAMTS10Q9H324 1103 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 RWDD1Q9H446 243 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ZFP64Q9NPA5 681 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 GPRC5CQ9NQ84 441 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 DIAPH3Q9NSV4 1193 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 SMC4Q9NTJ3 1288 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 STK26Q9P289 416 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 NDOR1Q9UHB4 597 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 USP25Q9UHP3 1055 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 GPR160Q9UJ42 338 aa3.76□□□□□ -1.81
CSDE1-216ENST00000534389 ABCC2Q92887 1545 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 KDM5DQ9BY66 1539 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 KIF16BQ96L93 1317 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 GRIN2AQ12879 1464 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 MAGI2Q86UL8 1455 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 DNAJC25-GNG10A0A024R161 153 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 CCDC163A0A0D9SF12 145 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 FITM1A5D6W6 292 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 SMTNL1A8MU46 457 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 KIAA1324LA8MWY0 1029 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-216ENST00000534389 GOLGA6L22H0YM25 854 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 BIN1O00499 593 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 PPP1R12AO14974 1030 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-216ENST00000534389 NPHS1O60500 1241 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 USP2O75604 605 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-216ENST00000534389 PRNPP04156 253 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 THBDP07204 575 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 FGFR1P11362 822 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 SPINK2P20155 84 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 FUT4P22083 530 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 ARL4AP40617 200 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 ST5P78524 1137 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 TEKQ02763 1124 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 LONRF2Q1L5Z9 754 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 GAB4Q2WGN9 574 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 RALGPS1Q5JS13 557 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 FAM209AQ5JX71 171 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 FBXO38Q6PIJ6 1188 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 SPRED2Q7Z698 418 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 JAZF1Q86VZ6 243 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 CPNE8Q86YQ8 564 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 Q8N3U1 123 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 ANKS4BQ8N8V4 417 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 TMEM145Q8NBT3 493 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 ZNF397Q8NF99 534 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-216ENST00000534389 NEK11Q8NG66 645 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 BORCS6Q96GS4 357 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 MRGPRX3Q96LB0 322 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 ALG1Q9BT22 464 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 DHRS4Q9BTZ2 278 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 UBXN6Q9BZV1 441 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 ARHGEF4Q9NR80 690 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 DONSONQ9NYP3 566 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 TNFRSF10DQ9UBN6 386 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 DBR1Q9UK59 544 aaKnown RBP3.75□□□□□ -1.81
CSDE1-216ENST00000534389 EXOC6BQ9Y2D4 811 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms