RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 COASYQ13057 564 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 CAMK1Q14012 370 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PLEKHG4Q58EX7 1191 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SEPT8Q92599 483 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 EXOC6BQ9Y2D4 811 aa12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 NOP58Q9Y2X3 529 aaKnown RBP12.11□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 NLRC5Q86WI3 1866 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 LCTP09848 1927 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ATG2AQ2TAZ0 1938 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 C5orf67F2Z3F1 127 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MMP1P03956 469 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 CTSHP09668 335 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 DNAJB1P25685 340 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 HIC1Q14526 733 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MFSD10Q14728 455 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 KIAA0753Q2KHM9 967 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 EFHBQ8N7U6 833 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 KREMEN2Q8NCW0 462 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PPP2R3CQ969Q6 453 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 APOL5Q9BWW9 433 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SMOC2Q9H3U7 446 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PCDHGC5Q9Y5F6 944 aa12.1□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PER2O15055 1255 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SORBS3O60504 671 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 GLP2RO95838 553 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 GH1P01241 217 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 TRIM27P14373 513 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 SLC16A2P36021 539 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PUM1Q14671 1186 aaKnown RBP eCLIP12.09□□□□□ -0.472e-9■■□□□ 12.1
NEDD8-MDP1-202ENST00000534348 DGKDQ16760 1214 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 RNF207Q6ZRF8 634 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ARHGAP45Q92619 1136 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 MPHOSPH6Q99547 160 aaKnown RBP12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PUS7LQ9H0K6 701 aaKnown RBP12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 BOLA2Q9H3K6 86 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PAG1Q9NWQ8 432 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PLAGL2Q9UPG8 496 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ZBED9Q6R2W3 1325 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 ATRXP46100 2492 aa12.09□□□□□ -0.47
NEDD8-MDP1-202ENST00000534348 PPFIA3O75145 1194 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 BRD1O95696 1058 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ICAM1P05362 532 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 TSPY3P0CV98 308 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 TSPY8P0CW00 308 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ARHGAP1Q07960 439 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 BTG3Q14201 252 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ASTLQ6HA08 431 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 GMCL1Q96IK5 515 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 SPTBN2O15020 2390 aa12.08□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ARP10275 920 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 RPS6P62753 249 aaKnown RBP12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 COL9A2Q14055 689 aaPredicted RBP12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ST3GAL2Q16842 350 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 RCSD1Q6JBY9 416 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 CCDC62Q6P9F0 684 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 TMEM57Q8N5G2 664 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 FLCNQ8NFG4 579 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 TLE6Q9H808 572 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 RWDD3Q9Y3V2 267 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 CEP250Q9BV73 2442 aa12.07□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ITGB1P05556 798 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 EDNRBP24530 442 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 TFAP4Q01664 338 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 MTMR3Q13615 1198 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 SBK1Q52WX2 424 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 TTBK2Q6IQ55 1244 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 SPPL3Q8TCT6 385 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 POF1BQ8WVV4 589 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 CLEC4DQ8WXI8 215 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ATP6V0A1Q93050 837 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 KATNAL1Q9BW62 490 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 RALGAPA2Q2PPJ7 1873 aa12.06□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 GSG1L2A8MUP6 293 aa12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 IPO8O15397 1037 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 LMNAP02545 664 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 APPP05067 770 aa12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 IFIT2P09913 472 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ATF7P17544 494 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 TDO2P48775 406 aa12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 ANGPT1Q15389 498 aa12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 DCLK2Q8N568 766 aa12.05□□□□□ -0.48
NEDD8-MDP1-202ENST00000534348 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms