RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GGPS1O95749 300 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 CD4P01730 458 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 RAG1P15918 1043 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 IFNAR1P17181 557 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
CPSF1-210ENST00000532935 ITGB8P26012 769 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 ICAM3P32942 547 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 PKN1Q16512 942 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 CELF3Q5SZQ8 465 aaKnown RBP17.63■□□□□ 0.41
CPSF1-210ENST00000532935 MYSM1Q5VVJ2 828 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 IL17RAQ96F46 866 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 GLT8D2Q9H1C3 349 aa17.63■□□□□ 0.41
CPSF1-210ENST00000532935 SPATA31C2B4DYI2 1134 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 FIBPO43427 364 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 FXR1P51114 621 aaKnown RBP eCLIP17.62■□□□□ 0.41
CPSF1-210ENST00000532935 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
CPSF1-210ENST00000532935 SEMA3FQ13275 785 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 DGKDQ16760 1214 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 TDHQ8IZJ6 230 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 RNF26Q9BY78 433 aaPredicted RBP17.62■□□□□ 0.41
CPSF1-210ENST00000532935 ALDH8A1Q9H2A2 487 aaPredicted RBP17.62■□□□□ 0.41
CPSF1-210ENST00000532935 EHMT1Q9H9B1 1298 aa17.62■□□□□ 0.41
CPSF1-210ENST00000532935 SORBS3O60504 671 aa17.61■□□□□ 0.41
CPSF1-210ENST00000532935 PPFIA3O75145 1194 aa17.61■□□□□ 0.41
CPSF1-210ENST00000532935 STK3Q13188 491 aa17.61■□□□□ 0.41
CPSF1-210ENST00000532935 NLRX1Q86UT6 975 aa17.61■□□□□ 0.41
CPSF1-210ENST00000532935 SPATA33Q96N06 139 aa17.61■□□□□ 0.41
CPSF1-210ENST00000532935 TRPV6Q9H1D0 765 aa17.61■□□□□ 0.41
CPSF1-210ENST00000532935 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
CPSF1-210ENST00000532935 TRIP12Q14669 1992 aaPredicted RBP17.6■□□□□ 0.41
CPSF1-210ENST00000532935 B4GALT4O60513 344 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 TIMP1P01033 207 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 FOSP01100 380 aaPredicted RBP17.6■□□□□ 0.41
CPSF1-210ENST00000532935 HOXD8P13378 290 aaPredicted RBP17.6■□□□□ 0.41
CPSF1-210ENST00000532935 CLK2P49760 499 aaKnown RBP17.6■□□□□ 0.41
CPSF1-210ENST00000532935 NEDD9Q14511 834 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 HSDL1Q3SXM5 330 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 NFRKBQ6P4R8 1299 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
CPSF1-210ENST00000532935 KAT2BQ92831 832 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 ZMYND12Q9H0C1 365 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 BCAS3Q9H6U6 928 aa17.6■□□□□ 0.41
CPSF1-210ENST00000532935 ESYT2A0FGR8 921 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 CPLX1O14810 134 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 ITGB5P18084 799 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 AP3B2Q13367 1082 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 FAM47CQ5HY64 1035 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 TRIM22Q8IYM9 498 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 PPP1R13LQ8WUF5 828 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 GPRASP2Q96D09 838 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 PGBD1Q96JS3 809 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 SENP7Q9BQF6 1050 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 ANO3Q9BYT9 981 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 TRMT13Q9NUP7 481 aaKnown RBP17.59■□□□□ 0.41
CPSF1-210ENST00000532935 TMEM260Q9NX78 707 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 UBIAD1Q9Y5Z9 338 aa17.59■□□□□ 0.41
CPSF1-210ENST00000532935 PPFIA4O75335 1185 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 AK2P54819 239 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 CHMP4BP1P59074 171 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 FPGSQ05932 587 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 PTPN11Q06124 597 aaPredicted RBP17.58■□□□□ 0.4
CPSF1-210ENST00000532935 SSRP1Q08945 709 aaKnown RBP17.58■□□□□ 0.4
CPSF1-210ENST00000532935 ANKRD1Q15327 319 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 MFSD5Q6N075 450 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 CPLX2Q6PUV4 134 aaKnown RBP17.58■□□□□ 0.4
CPSF1-210ENST00000532935 METTL7BQ6UX53 244 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 CYFIP1Q7L576 1253 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 CDHR1Q96JP9 859 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 KATNAL1Q9BW62 490 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 PPP1R12CQ9BZL4 782 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 C6orf50Q9HD87 102 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 JADE2Q9NQC1 790 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 TPCN1Q9ULQ1 816 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 KAT6AQ92794 2004 aa17.58■□□□□ 0.4
CPSF1-210ENST00000532935 TANC1Q9C0D5 1861 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 F2P00734 622 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 SUPT20HL2P0C7V6 817 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 GNA11P29992 359 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 SREBF1P36956 1147 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 PSEN2P49810 448 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 SCRN1Q12765 414 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 MTMR1Q13613 665 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 JAKMIP3Q5VZ66 844 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 SLKQ9H2G2 1235 aaPredicted RBP17.57■□□□□ 0.4
CPSF1-210ENST00000532935 HIPK3Q9H422 1215 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 VPS54Q9P1Q0 977 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 SCN5AQ14524 2016 aa17.57■□□□□ 0.4
CPSF1-210ENST00000532935 NOP56O00567 594 aaKnown RBP17.56■□□□□ 0.4
CPSF1-210ENST00000532935 ADAMTS3O15072 1205 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 PFKFB2O60825 505 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 ATP9AO75110 1047 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 DEXIO95424 95 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 KCNA2P16389 499 aa17.56■□□□□ 0.4
CPSF1-210ENST00000532935 CYP2C18P33260 490 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms