RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
CTNND1-230ENST00000532245 KIF20BQ96Q89 1820 aa8.76□□□□□ -1.01
CTNND1-230ENST00000532245 ZNF543Q08ER8 600 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 TOB2Q14106 344 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 LONRF3Q496Y0 759 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 ZNF771Q7L3S4 317 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 RHPN2Q8IUC4 686 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 LBHD1Q9BQE6 289 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 POLD4Q9HCU8 107 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 WNT10BO00744 389 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 GAP43P17677 238 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 PRELPP51888 382 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 ZRSR2Q15696 482 aaKnown RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 NLGN2Q8NFZ4 835 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 PPP1R9BQ96SB3 815 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 EPB41L4AQ9HCS5 686 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 CTTNBP2NLQ9P2B4 639 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 POLIQ9UNA4 740 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 PXDNLA1KZ92 1463 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 PLCG1P19174 1290 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 LACTBP83111 547 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 KRT76Q01546 638 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 THNSL1Q8IYQ7 743 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 GRAMD1CQ8IYS0 662 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 SLC17A8Q8NDX2 589 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 TCP11Q8WWU5 503 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 PARVGQ9HBI0 331 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 ZNF609O15014 1411 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 RFX7Q2KHR2 1363 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 SYNJ2BP-COX16A0A087WUM0 186 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 IPO5O00410 1097 aaKnown RBP8.75□□□□□ -1.01
CTNND1-230ENST00000532245 DDIT3P35638 169 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 KLHL30Q0D2K2 578 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 MORC3Q14149 939 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 CYFIP1Q7L576 1253 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 MB21D1Q8N884 522 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 SMC1BQ8NDV3 1235 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 ACER1Q8TDN7 264 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 CAPZA3Q96KX2 299 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 CCDC114Q96M63 670 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 BARHL2Q9NY43 387 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 COX16Q9P0S2 106 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 TTLL3Q9Y4R7 772 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 IKBKGQ9Y6K9 419 aa8.75□□□□□ -1.01
CTNND1-230ENST00000532245 RARBP10826 455 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 GTF3C2Q8WUA4 911 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 DYDC1Q8WWB3 177 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 KAZALD1Q96I82 304 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 DYDC2Q96IM9 177 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 ATP6V0A4Q9HBG4 840 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 EIF3JO75822 258 aaKnown RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SLC9C1Q4G0N8 1177 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 PPP1R18Q6NYC8 613 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 RRAGAQ7L523 313 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 KIAA1468Q9P260 1216 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 DDTLA6NHG4 134 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SLC25A27O95847 323 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 CTSHP09668 335 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 IL1R1P14778 569 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 NR2F2P24468 414 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 ARL1P40616 181 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 RNASE9P60153 205 aaKnown RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 USP50Q70EL3 339 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SNX25Q9H3E2 840 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 FBXO28Q9NVF7 368 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 NXF1Q9UBU9 619 aaKnown RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 GOLGA8IPA6NC78 632 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 GOLGA8JA6NMD2 632 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 KCNJ18B7U540 433 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 GGPS1O95749 300 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 KCNJ12Q14500 433 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 CCDC122Q5T0U0 273 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 EPSTI1Q96J88 318 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 TSNARE1Q96NA8 513 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 CCDC94Q9BW85 323 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 CBX8Q9HC52 389 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 DNAI1Q9UI46 699 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 MED1Q15648 1581 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 PPP6R2O75170 966 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 TRPA1O75762 1119 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SFMBT2Q5VUG0 894 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SCYL2Q6P3W7 929 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 POTEDQ86YR6 584 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SMYD4Q8IYR2 804 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 ZNF710Q8N1W2 664 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SRBD1Q8N5C6 995 aaKnown RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 CACTINQ8WUQ7 758 aaKnown RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.016e-7■■□□□ 14.4
CTNND1-230ENST00000532245 MSTO1Q9BUK6 570 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 ZMYND15Q9H091 742 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 RPF1Q9H9Y2 349 aaKnown RBP8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SLC9A2Q9UBY0 812 aa8.74□□□□□ -1.01
CTNND1-230ENST00000532245 SIGLEC1Q9BZZ2 1709 aa8.73□□□□□ -1.01
CTNND1-230ENST00000532245 TM4SF1P30408 202 aa8.73□□□□□ -1.01
CTNND1-230ENST00000532245 ELF1P32519 619 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms