RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FSTL4Q6MZW2 842 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 CYP2R1Q6VVX0 501 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 Q8N1Y9 231 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 CISD2Q8N5K1 135 aaKnown RBP4.04□□□□□ -1.76
CD44-234ENST00000531873 CHTF18Q8WVB6 975 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 DPF3Q92784 378 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 C8orf48Q96LL4 319 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 GPR101Q96P66 508 aaPredicted RBP4.04□□□□□ -1.76
CD44-234ENST00000531873 YIPF4Q9BSR8 244 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 RTFDC1Q9BY42 306 aaPredicted RBP4.04□□□□□ -1.76
CD44-234ENST00000531873 VTA1Q9NP79 307 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 THG1LQ9NWX6 298 aaKnown RBP4.04□□□□□ -1.76
CD44-234ENST00000531873 H2AFY2Q9P0M6 372 aaPredicted RBP4.04□□□□□ -1.76
CD44-234ENST00000531873 TCEAL9Q9UHQ7 104 aa4.04□□□□□ -1.76
CD44-234ENST00000531873 NCANO14594 1321 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 PTPDC1A2A3K4 754 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 ZNF561-AS1K7EIQ3 104 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 FZD9O00144 591 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 BIN1O00499 593 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 PRRG2O14669 202 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 BCL6P41182 706 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 DNM2P50570 870 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 PPP2R5AQ15172 486 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 PKN1Q16512 942 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 INAVAQ3KP66 663 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 ATP13A4Q4VNC1 1196 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 DUSP27Q5VZP5 1158 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 ARHGAP27Q6ZUM4 889 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 C16orf59Q7L2K0 433 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 OTOP1Q7RTM1 612 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 TMPRSS7Q7RTY8 843 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 CILP2Q8IUL8 1156 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 CLRN3Q8NCR9 226 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 BHLHE22Q8NFJ8 381 aaPredicted RBP4.03□□□□□ -1.76
CD44-234ENST00000531873 FBXW5Q969U6 566 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 CHMP4CQ96CF2 233 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 HOOK2Q96ED9 719 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 FCRL2Q96LA5 508 aaPredicted RBP4.03□□□□□ -1.76
CD44-234ENST00000531873 G6PC3Q9BUM1 346 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 CDH19Q9H159 772 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 SMURF1Q9HCE7 757 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 LRRC4CQ9HCJ2 640 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 ATP13A1Q9HD20 1204 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 CABP5Q9NP86 173 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 ZIM2Q9NZV7 527 aa4.03□□□□□ -1.76
CD44-234ENST00000531873 TCRBV5S4A2TA0A5A2 114 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 FAM47E-STBD1D6RA91 191 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 CYP26A1O43174 497 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 TGM5O43548 720 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 GAS7O60861 476 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 PPP1R11O60927 126 aaPredicted RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 AMY2AP04746 511 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 AMY2BP19961 511 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 ENDOUP21128 410 aaKnown RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 FPR2P25090 351 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 IARSP41252 1262 aaKnown RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 RPL11P62913 178 aaKnown RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 EGR3Q06889 387 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 LSAMPQ13449 338 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 SART3Q15020 963 aaKnown RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 IFI16Q16666 785 aaKnown RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 ABCB5Q2M3G0 1257 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 FAM47CQ5HY64 1035 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 HABP4Q5JVS0 413 aaKnown RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 WAPLQ7Z5K2 1190 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 CREG2Q8IUH2 290 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 NAT16Q8N8M0 369 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 FLCNQ8NFG4 579 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 OXSMQ9NWU1 459 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 FBLN5Q9UBX5 448 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 ZC3H7BQ9UGR2 993 aaKnown RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 EBF1Q9UH73 591 aa4.02□□□□□ -1.77
CD44-234ENST00000531873 TIMM13Q9Y5L4 95 aaPredicted RBP4.02□□□□□ -1.77
CD44-234ENST00000531873 SSU72P8A0A1W2PR75 194 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 H7BY64 318 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 DVL2O14641 736 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 MYO1BO43795 1136 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 ABLIM3O94929 683 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 FBXO21O94952 628 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 TBC1D8O95759 1140 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 APPP05067 770 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 ZBTB48P10074 688 aaPredicted RBP4.01□□□□□ -1.77
CD44-234ENST00000531873 PDE6AP16499 860 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 RPL10P27635 214 aaKnown RBP4.01□□□□□ -1.77
CD44-234ENST00000531873 JAM2P57087 298 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 ST5P78524 1137 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 LACTBP83111 547 aaPredicted RBP4.01□□□□□ -1.77
CD44-234ENST00000531873 IQSEC1Q6DN90 963 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 LILRA6Q6PI73 481 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 ZBTB46Q86UZ6 589 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 NOSTRINQ8IVI9 506 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 WDR75Q8IWA0 830 aaKnown RBP4.01□□□□□ -1.77
CD44-234ENST00000531873 TEX2Q8IWB9 1127 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 EFHBQ8N7U6 833 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 NETO1Q8TDF5 533 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 SH3RF2Q8TEC5 729 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 RELTQ969Z4 430 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 MAP6Q96JE9 813 aa4.01□□□□□ -1.77
CD44-234ENST00000531873 KCNJ15Q99712 375 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms