RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 BANK1Q8NDB2 785 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 NEK9Q8TD19 979 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 EVI5LQ96CN4 794 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 FBXL18Q96ME1 805 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 KATNAL1Q9BW62 490 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 MRVI1Q9Y6F6 885 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 ATG2AQ2TAZ0 1938 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 HAS3O00219 553 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 UPP2O95045 317 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 F2P00734 622 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 HTRA4P83105 476 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-208ENST00000529994 GPM6BQ13491 265 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 CDC37Q16543 378 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-208ENST00000529994 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 RGS22Q8NE09 1264 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 FAM227BQ96M60 508 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 CTNNA3Q9UI47 895 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 ZNF318Q5VUA4 2279 aa13.23□□□□□ -0.29
SF3B2-208ENST00000529994 ABCB11O95342 1321 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 A0A0D9SFI3 127 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 ZP2Q05996 745 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 LAMC2Q13753 1193 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 CLUL1Q15846 466 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 PUS10Q3MIT2 529 aaKnown RBP13.22□□□□□ -0.29
SF3B2-208ENST00000529994 TIGD5Q53EQ6 642 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 GPATCH4Q5T3I0 446 aaKnown RBP13.22□□□□□ -0.29
SF3B2-208ENST00000529994 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 MFSD6Q6ZSS7 791 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 PPTC7Q8NI37 304 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-208ENST00000529994 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-208ENST00000529994 IWS1Q96ST2 819 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 VAT1LQ9HCJ6 419 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 CLDND1Q9NY35 253 aa13.22□□□□□ -0.29
SF3B2-208ENST00000529994 EMSYQ7Z589 1322 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 H3BNC9 293 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 DHX16O60231 1041 aaKnown RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 EIF3JO75822 258 aaKnown RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 CSPG5O95196 566 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 CFBP00751 764 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 NR3C2P08235 984 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 CTSHP09668 335 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 MYCLP12524 364 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 NUCB1Q02818 461 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 QRICH1Q2TAL8 776 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 HFE2Q6ZVN8 426 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 MCF2L2Q86YR7 1114 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 TMEM192Q8IY95 271 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 PABPC5Q96DU9 382 aaKnown RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-208ENST00000529994 TTC14Q96N46 770 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 PXMP2Q9NR77 195 aa13.21□□□□□ -0.29
SF3B2-208ENST00000529994 NEDD4P46934 1319 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-208ENST00000529994 HSDL1Q3SXM5 330 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 MCMDC2Q4G0Z9 681 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 PLEKHG4Q58EX7 1191 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 SERINC5Q86VE9 423 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 PLEKHM2Q8IWE5 1019 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 ATP6V0A1Q93050 837 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 SAMD11Q96NU1 681 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
SF3B2-208ENST00000529994 RALGAPA2Q2PPJ7 1873 aa13.2□□□□□ -0.3
SF3B2-208ENST00000529994 DOCK5Q9H7D0 1870 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.19□□□□□ -0.3
SF3B2-208ENST00000529994 C17orf102A2RUQ5 167 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 TREHO43280 583 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 RGS20O76081 388 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 GGPS1O95749 300 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 IRS1P35568 1242 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 SP2Q02086 613 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
SF3B2-208ENST00000529994 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 RPAINQ86UA6 219 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 SEPT8Q92599 483 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 GPKOWQ92917 476 aaPredicted RBP eCLIP13.19□□□□□ -0.3
SF3B2-208ENST00000529994 TOP1MTQ969P6 601 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 PHOX2BQ99453 314 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 C16orf70Q9BSU1 422 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
SF3B2-208ENST00000529994 MUTYHQ9UIF7 546 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms