RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ZBTB38Q8NAP3 1195 aaPredicted RBP6.73□□□□□ -1.33
C11orf88-204ENST00000529661 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
C11orf88-204ENST00000529661 IPO9Q96P70 1041 aaKnown RBP6.73□□□□□ -1.33
C11orf88-204ENST00000529661 DNAJC7Q99615 494 aa6.73□□□□□ -1.33
C11orf88-204ENST00000529661 JAM3Q9BX67 310 aa6.73□□□□□ -1.33
C11orf88-204ENST00000529661 EPB41L1Q9H4G0 881 aa6.73□□□□□ -1.33
C11orf88-204ENST00000529661 PPARGC1AQ9UBK2 798 aaKnown RBP6.73□□□□□ -1.33
C11orf88-204ENST00000529661 KDM2BQ8NHM5 1336 aa6.73□□□□□ -1.33
C11orf88-204ENST00000529661 HGSO14964 777 aaPredicted RBP6.72□□□□□ -1.33
C11orf88-204ENST00000529661 PLA2G1BP04054 148 aaKnown RBP6.72□□□□□ -1.33
C11orf88-204ENST00000529661 HSD3B2P26439 372 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 CACNB2Q08289 660 aaPredicted RBP6.72□□□□□ -1.33
C11orf88-204ENST00000529661 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 FAM209AQ5JX71 171 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 FOXB2Q5VYV0 432 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 STEAP3Q658P3 488 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 LBX2Q6XYB7 198 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 ZNF662Q6ZS27 426 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 CPA5Q8WXQ8 436 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 YIPF4Q9BSR8 244 aa6.72□□□□□ -1.33
C11orf88-204ENST00000529661 SBNO2Q9Y2G9 1366 aa6.71□□□□□ -1.33
C11orf88-204ENST00000529661 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 FAM153BP0C7A2 387 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 STAT5AP42229 794 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 GPR85P60893 370 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 STYK1Q6J9G0 422 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 CD300LDQ6UXZ3 194 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 SCUBE1Q8IWY4 988 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 FNIP1Q8TF40 1166 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.71□□□□□ -1.34
C11orf88-204ENST00000529661 DDX11Q96FC9 970 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 KCNJ15Q99712 375 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 CDIP1Q9H305 208 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 TRAF6Q9Y4K3 522 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
C11orf88-204ENST00000529661 TRIM13O60858 407 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 C8BP07358 591 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 CYP2C8P10632 490 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 GRK2P25098 689 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 GRK3P35626 688 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
C11orf88-204ENST00000529661 KIZQ2M2Z5 673 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 ZC3H18Q86VM9 953 aaKnown RBP6.7□□□□□ -1.34
C11orf88-204ENST00000529661 MIB1Q86YT6 1006 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 IFNL3Q8IZI9 196 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 FAM26EQ8N5C1 309 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 JMYQ8N9B5 988 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 NOX5Q96PH1 765 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 ZFYVE21Q9BQ24 234 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 SYT3Q9BQG1 590 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 ZCCHC4Q9H5U6 513 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 ZNF652Q9Y2D9 606 aa6.7□□□□□ -1.34
C11orf88-204ENST00000529661 ASXL2Q76L83 1435 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 ENPP3O14638 875 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 FFAR3O14843 346 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 INHBBP09529 407 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 LINC01356Q8N9X3 169 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.69□□□□□ -1.34
C11orf88-204ENST00000529661 PIP4K2CQ8TBX8 421 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 ZBTB8AQ96BR9 441 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 EXOC2Q96KP1 924 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 ALG1Q9BT22 464 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 MYOTQ9UBF9 498 aa6.69□□□□□ -1.34
C11orf88-204ENST00000529661 A0A1B0GTL3 188 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 KRIT1O00522 736 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 MAFKO60675 156 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 GNAT1P11488 350 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 HTRA3P83110 453 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 SMAD4Q13485 552 aaKnown RBP6.68□□□□□ -1.34
C11orf88-204ENST00000529661 EMC4Q5J8M3 183 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 MTDHQ86UE4 582 aaKnown RBP6.68□□□□□ -1.34
C11orf88-204ENST00000529661 FAM126BQ8IXS8 530 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 ARRDC4Q8NCT1 418 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 SH3TC2Q8TF17 1288 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 KANSL2Q9H9L4 492 aa6.68□□□□□ -1.34
C11orf88-204ENST00000529661 TCRBV5S2A0A599 114 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 TADA3O75528 432 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 SOD2P04179 222 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 COL6A2P12110 1019 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 VWA3BQ502W6 1294 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 MAMDC2Q7Z304 686 aaPredicted RBP6.67□□□□□ -1.34
C11orf88-204ENST00000529661 STK32CQ86UX6 486 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 ZNF526Q8TF50 670 aaPredicted RBP6.67□□□□□ -1.34
C11orf88-204ENST00000529661 PTPRN2Q92932 1015 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 GORASP1Q9BQQ3 440 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 DHRS4Q9BTZ2 278 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 SMOC1Q9H4F8 434 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 PARD6AQ9NPB6 346 aa6.67□□□□□ -1.34
C11orf88-204ENST00000529661 MRPS23Q9Y3D9 190 aaKnown RBP6.67□□□□□ -1.34
C11orf88-204ENST00000529661 ANKRD62A6NC57 917 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 FAM47E-STBD1D6RA91 191 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 AQP7O14520 342 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 SLC27A2O14975 620 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 SASH1O94885 1247 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 CLSTN1O94985 981 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 NKX3-2P78367 333 aa6.66□□□□□ -1.34
C11orf88-204ENST00000529661 SPIRE1Q08AE8 756 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms