RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CACTINQ8WUQ7 758 aaKnown RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 AK8Q96MA6 479 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 RPS6KC1Q96S38 1066 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 NHEJ1Q9H9Q4 299 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 ARHGEF5Q12774 1597 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 BMP3P12645 472 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 EEF1GP26641 437 aaKnown RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 KIF11P52732 1056 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 TSTA3Q13630 321 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CTTNQ14247 550 aaKnown RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 PPP2R5EQ16537 467 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 MTERF2Q49AM1 385 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CCDC17Q96LX7 622 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CLASP1Q7Z460 1538 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 SLC4A1P02730 911 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 GAP43P17677 238 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 RASGRF1Q13972 1273 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 MAN2A1Q16706 1144 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 RWDD2AQ9UIY3 292 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 GOLGA8IPA6NC78 632 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 GOLGA8JA6NMD2 632 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 HEXIM1O94992 359 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 KRT1P04264 644 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 CCT5P48643 541 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 TFAMQ00059 246 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 RESTQ13127 1097 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 SUSD4Q5VX71 490 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 RAPH1Q70E73 1250 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 ATP6V0A1Q93050 837 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 TRIM56Q9BRZ2 755 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 BZW2Q9Y6E2 419 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 CFAP74Q9C0B2 1584 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 PLEKHG1Q9ULL1 1385 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 PLTPP55058 493 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 CDC37Q16543 378 aaPredicted RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 SCARA5Q6ZMJ2 495 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 ZNF277Q9NRM2 450 aaPredicted RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 GJB4Q9NTQ9 266 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 ATP8A1Q9Y2Q0 1164 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 IKBKBO14920 756 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 PRPF3O43395 683 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 CLTAP09496 248 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 SLFN14P0C7P3 912 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 CD58P19256 250 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 RFX1P22670 979 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 EIF4A3P38919 411 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 KIF22Q14807 665 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 RBBP5Q15291 538 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 TMED2Q15363 201 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 SGO2Q562F6 1265 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 SLC7A3Q8WY07 619 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 HDAC11Q96DB2 347 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 SERPINB13Q9UIV8 391 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 SFI1A8K8P3 1242 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 INHBAP08476 426 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 PLA2G4BP0C869 781 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 GARSP41250 739 aaKnown RBP8.83□□□□□ -1
CTNND1-220ENST00000529526 MCUQ8NE86 351 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 NLRP7Q8WX94 980 aa8.83□□□□□ -1
CTNND1-220ENST00000529526 HEG1Q9ULI3 1381 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 ACTN1P12814 892 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CASP2P42575 452 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 SLC7A5Q01650 507 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 MAP7Q14244 749 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 PRPSAP1Q14558 356 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 PLCB4Q15147 1175 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CYP4F22Q6NT55 531 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 GBP7Q8N8V2 638 aaPredicted RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 BBOF1Q8ND07 529 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CFAP61Q8NHU2 1237 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 PIGBQ92521 554 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 KANSL2Q9H9L4 492 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 EMILIN3Q9NT22 766 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 NUB1Q9Y5A7 615 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 MARK3P27448 753 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 SLCO1A2P46721 670 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 RCN2Q14257 317 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 ZKSCAN8Q15776 578 aaPredicted RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 JADE1Q6IE81 842 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 LRRC43Q8N309 656 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CCNYQ8ND76 341 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 MIS12Q9H081 205 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -19e-8■□□□□ 10.6
CTNND1-220ENST00000529526 PCDHA13Q9Y5I0 950 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CYP2D6P10635 497 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 MCAMP43121 646 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CDK8P49336 464 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 SH3RF3Q8TEJ3 882 aaPredicted RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 FAM149B1Q96BN6 582 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CCDC68Q9H2F9 335 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CPSF2Q9P2I0 782 aaKnown RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 TBK1Q9UHD2 729 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 SRPRBQ9Y5M8 271 aaKnown RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 OPHN1O60890 802 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 SERPINB6P35237 376 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 ARPP19P56211 112 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 BPIFB4P59827 614 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 PDE1BQ01064 536 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms