RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ATP9AO75110 1047 aa27.95■■■□□ 2.06
LDLRAD3-203ENST00000528989 SEPT14Q6ZU15 432 aa27.95■■■□□ 2.06
LDLRAD3-203ENST00000528989 ARMCX2Q7L311 632 aa27.95■■■□□ 2.06
LDLRAD3-203ENST00000528989 GABRQQ9UN88 632 aa27.95■■■□□ 2.06
LDLRAD3-203ENST00000528989 CUTAO60888 179 aa27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 MAP2K1Q02750 393 aaPredicted RBP27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 CD99L2Q8TCZ2 262 aa27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 GPT2Q8TD30 523 aa27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 ZNF577Q9BSK1 485 aa27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 FLRT1Q9NZU1 646 aa27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 PCDHA12Q9UN75 941 aa27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 HTTP42858 3142 aa27.94■■■□□ 2.06
LDLRAD3-203ENST00000528989 PP2D1A8MPX8 630 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 IPO5O00410 1097 aaKnown RBP27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 SETQ01105 290 aaPredicted RBP27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 CCL14Q16627 93 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 NIPA1Q7RTP0 329 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 EPSTI1Q96J88 318 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 GOLPH3LQ9H4A5 285 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 BCAS3Q9H6U6 928 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 SAGE1Q9NXZ1 904 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 DIS3Q9Y2L1 958 aaKnown RBP27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 A0A1B0GVL5 298 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 FBXO16Q8IX29 292 aaPredicted RBP27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 MORC4Q8TE76 937 aa27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 AGO4Q9HCK5 861 aaKnown RBP27.93■■■□□ 2.06
LDLRAD3-203ENST00000528989 POTEMA6NI47 508 aa27.92■■■□□ 2.06
LDLRAD3-203ENST00000528989 ASB14A6NK59 587 aa27.92■■■□□ 2.06
LDLRAD3-203ENST00000528989 TBX3O15119 743 aa27.92■■■□□ 2.06
LDLRAD3-203ENST00000528989 ITGB3BPQ13352 177 aaPredicted RBP27.92■■■□□ 2.06
LDLRAD3-203ENST00000528989 SLFN12Q8IYM2 578 aa27.92■■■□□ 2.06
LDLRAD3-203ENST00000528989 ZNF296Q8WUU4 475 aaPredicted RBP27.92■■■□□ 2.06
LDLRAD3-203ENST00000528989 FAM20AQ96MK3 541 aa27.92■■■□□ 2.06
LDLRAD3-203ENST00000528989 STAM2O75886 525 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 HOXC6P09630 235 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 ZNF467Q7Z7K2 595 aaPredicted RBP27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 NLRX1Q86UT6 975 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 SOCS4Q8WXH5 440 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 SLC5A5Q92911 643 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 GPRASP2Q96D09 838 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 BEGAINQ9BUH8 593 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 B4DLN1 442 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 SNAI1O95863 264 aaPredicted RBP27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 LIG1P18858 919 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 CMA1P23946 247 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 SP2Q02086 613 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 PRKCZQ05513 592 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 KIF22Q14807 665 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 MAMDC4Q6UXC1 1216 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 ZNF579Q8NAF0 562 aaKnown RBP27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 MPHOSPH6Q99547 160 aaKnown RBP27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 TINF2Q9BSI4 451 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 PDGFCQ9NRA1 345 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 SLC5A4Q9NY91 659 aa27.91■■■□□ 2.06
LDLRAD3-203ENST00000528989 A0A1W2PQ27 194 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 A0A1W2PQ64 194 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 A0A1W2PQD8 194 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 SPATA31C2B4DYI2 1134 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 DHX15O43143 795 aaKnown RBP27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 PSMD10O75832 226 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 RGS2P41220 211 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 FLT3LGP49771 235 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 FXR2P51116 673 aaKnown RBP eCLIP27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 IGSF22Q8N9C0 903 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 FSIP1Q8NA03 581 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 SYMPKQ92797 1274 aaKnown RBP27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 WBP1LQ9NX94 342 aa27.9■■■□□ 2.06
LDLRAD3-203ENST00000528989 DDX39AO00148 427 aaKnown RBP27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 SORBS3O60504 671 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 SPIRE1Q08AE8 756 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 TMEM63BQ5T3F8 832 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 LRCH2Q5VUJ6 765 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 RESP18Q5W5W9 173 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 PANK2Q9BZ23 570 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 VAV3Q9UKW4 847 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 PLXNA1Q9UIW2 1896 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 MCM3APO60318 1980 aa27.89■■■□□ 2.06
LDLRAD3-203ENST00000528989 LONP1P36776 959 aaKnown RBP27.89■■■□□ 2.05
LDLRAD3-203ENST00000528989 GNPTABQ3T906 1256 aa27.89■■■□□ 2.05
LDLRAD3-203ENST00000528989 OTOP1Q7RTM1 612 aa27.89■■■□□ 2.05
LDLRAD3-203ENST00000528989 NDUFA8P51970 172 aa27.88■■■□□ 2.05
LDLRAD3-203ENST00000528989 MRPS27Q92552 414 aaKnown RBP27.88■■■□□ 2.05
LDLRAD3-203ENST00000528989 APBA2Q99767 749 aa27.88■■■□□ 2.05
LDLRAD3-203ENST00000528989 MGAMO43451 1857 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 LOC102724159A0A0B4J2E5 919 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 MAFGO15525 162 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 GAS7O60861 476 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 KCNA2P16389 499 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 CYP2C19P33261 490 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 PWP2Q15269 919 aaKnown RBP27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 TMEM266Q2M3C6 531 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 PRAMEF19Q5SWL8 479 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 KATNBL1Q9H079 304 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 LRWD1Q9UFC0 647 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 TELO2Q9Y4R8 837 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 ZNF236Q9UL36 1845 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 CHMP2AO43633 222 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 FKTNO75072 461 aa27.87■■■□□ 2.05
LDLRAD3-203ENST00000528989 ARIH2O95376 493 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms