RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TRPV6Q9H1D0 765 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 MLXIPQ9HAP2 919 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 NOD1Q9Y239 953 aa11.05□□□□□ -0.64
CHD7-208ENST00000528280 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 ARIH2O95376 493 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 PARNO95453 639 aaKnown RBP11.04□□□□□ -0.64
CHD7-208ENST00000528280 FOSP01100 380 aaPredicted RBP11.04□□□□□ -0.64
CHD7-208ENST00000528280 MMP3P08254 477 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 RFC2P35250 354 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 RTN1Q16799 776 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 C9orf50Q5SZB4 431 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 MYSM1Q5VVJ2 828 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 PCNX4Q63HM2 1172 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 MCTP2Q6DN12 878 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 RASEFQ8IZ41 740 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 CCDC82Q8N4S0 544 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 C7orf31Q8N865 590 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 SENP7Q9BQF6 1050 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 NOC4LQ9BVI4 516 aaKnown RBP11.04□□□□□ -0.64
CHD7-208ENST00000528280 LRRC2Q9BYS8 371 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 TCF20Q9UGU0 1960 aaKnown RBP11.04□□□□□ -0.64
CHD7-208ENST00000528280 MYO9BQ13459 2157 aa11.04□□□□□ -0.64
CHD7-208ENST00000528280 LCTP09848 1927 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 MEIS2O14770 477 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 FIBPO43427 364 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 CSF2RAP15509 400 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 CYP2C18P33260 490 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 ADCK5Q3MIX3 580 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 PPP1R18Q6NYC8 613 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 JAKMIP1Q96N16 626 aaKnown RBP11.03□□□□□ -0.64
CHD7-208ENST00000528280 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
CHD7-208ENST00000528280 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
CHD7-208ENST00000528280 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
CHD7-208ENST00000528280 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
CHD7-208ENST00000528280 PIEZO1Q92508 2521 aa11.02□□□□□ -0.64
CHD7-208ENST00000528280 KLF18A0A0U1RQI7 1052 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 GOLGA8AA7E2F4 631 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 GOLGA8BA8MQT2 603 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 NOP56O00567 594 aaKnown RBP11.02□□□□□ -0.65
CHD7-208ENST00000528280 RGS20O76081 388 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 GGPS1O95749 300 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 ACTN1P12814 892 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 HOXD8P13378 290 aaPredicted RBP11.02□□□□□ -0.65
CHD7-208ENST00000528280 RXRAP19793 462 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 PTGS1P23219 599 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 EPHB4P54760 987 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 AKAP17AQ02040 695 aaKnown RBP11.02□□□□□ -0.65
CHD7-208ENST00000528280 PTGISQ16647 500 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 USP17L6PQ6QN14 398 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 Q6ZUG5 572 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 ZNF365Q70YC5 407 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 HEATR3Q7Z4Q2 680 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 CMTR1Q8N1G2 835 aaKnown RBP11.02□□□□□ -0.65
CHD7-208ENST00000528280 USP38Q8NB14 1042 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 CAGE1Q8TC20 777 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 CCDC12Q8WUD4 166 aaPredicted RBP11.02□□□□□ -0.65
CHD7-208ENST00000528280 HERVK_113Q902F9 699 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.02□□□□□ -0.659e-6■□□□□ 9.3
CHD7-208ENST00000528280 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
CHD7-208ENST00000528280 BRPF3Q9ULD4 1205 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.65
CHD7-208ENST00000528280 SNX14Q9Y5W7 946 aa11.02□□□□□ -0.65
CHD7-208ENST00000528280 KIAA1217Q5T5P2 1943 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 LRRC37A2A6NM11 1700 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 GNAT1P11488 350 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 RPS6KB1P23443 525 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 PSEN2P49810 448 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 METAP2P50579 478 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHD7-208ENST00000528280 NAPAP54920 295 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 CCL23P55773 120 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 CHMP4BP1P59074 171 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 MRPS9P82933 396 aaKnown RBP11.01□□□□□ -0.65
CHD7-208ENST00000528280 MFSD10Q14728 455 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 METTL7BQ6UX53 244 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 C16orf59Q7L2K0 433 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 ATXN2LQ8WWM7 1075 aaKnown RBP11.01□□□□□ -0.65
CHD7-208ENST00000528280 TNPO1Q92973 898 aaKnown RBP11.01□□□□□ -0.65
CHD7-208ENST00000528280 GPRASP2Q96D09 838 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 TM6SF1Q9BZW5 370 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 RIC8AQ9NPQ8 531 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 RTEL1Q9NZ71 1219 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 PCDHA6Q9UN73 950 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 PCDHA8Q9Y5H6 950 aa11.01□□□□□ -0.65
CHD7-208ENST00000528280 SMCO2A6NFE2 343 aa11□□□□□ -0.65
CHD7-208ENST00000528280 H3BRB1 525 aa11□□□□□ -0.65
CHD7-208ENST00000528280 HAS3O00219 553 aa11□□□□□ -0.65
CHD7-208ENST00000528280 F2P00734 622 aa11□□□□□ -0.65
CHD7-208ENST00000528280 IQCF3P0C7M6 154 aa11□□□□□ -0.65
CHD7-208ENST00000528280 CYP2C9P11712 490 aa11□□□□□ -0.65
CHD7-208ENST00000528280 UBA1P22314 1058 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms