RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 CNOT6LQ96LI5 555 aaKnown RBP17.75■□□□□ 0.43
USH1C-204ENST00000526313 VAV3Q9UKW4 847 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 MRPL11Q9Y3B7 192 aaKnown RBP17.75■□□□□ 0.43
USH1C-204ENST00000526313 PCDHA2Q9Y5H9 948 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 POTEB3A0JP26 581 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 FRMD3A2A2Y4 597 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 SOWAHDA6NJG2 315 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 POTECB2RU33 542 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 ABCB11O95342 1321 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 SPATA31C1P0DKV0 1188 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 SLC12A3P55017 1021 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 COASYQ13057 564 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 POTEBQ6S5H4 581 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 CATSPER3Q86XQ3 398 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 ZNF710Q8N1W2 664 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 KCTD17Q8N5Z5 321 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 TBC1D5Q92609 795 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
USH1C-204ENST00000526313 ABHD10Q9NUJ1 306 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 ADGRG1Q9Y653 693 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 PITPNM2Q9BZ72 1349 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
USH1C-204ENST00000526313 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 CYP11B2P19099 503 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 MTF1Q14872 753 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 MIIPQ5JXC2 388 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 TMTC1Q8IUR5 882 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 SGIP1Q9BQI5 828 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 ATAD5Q96QE3 1844 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 EGFRP00533 1210 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 IDEP14735 1019 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 ZCWPW2Q504Y3 356 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 ARSHQ5FYA8 562 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 CREBRFQ8IUR6 639 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 ERMNQ8TAM6 284 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 CYP2W1Q8TAV3 490 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 PANK4Q9NVE7 773 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 CAPN11Q9UMQ6 739 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 CD2APQ9Y5K6 639 aa17.74■□□□□ 0.43
USH1C-204ENST00000526313 FANCGO15287 622 aa17.73■□□□□ 0.43
USH1C-204ENST00000526313 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
USH1C-204ENST00000526313 CCDC174Q6PII3 467 aa17.73■□□□□ 0.43
USH1C-204ENST00000526313 ANKRD7Q92527 254 aa17.73■□□□□ 0.43
USH1C-204ENST00000526313 UIMC1Q96RL1 719 aa17.73■□□□□ 0.43
USH1C-204ENST00000526313 ERGIC2Q96RQ1 377 aa17.73■□□□□ 0.43
USH1C-204ENST00000526313 POLR3CQ9BUI4 534 aaPredicted RBP17.73■□□□□ 0.43
USH1C-204ENST00000526313 TTYH3Q9C0H2 523 aa17.73■□□□□ 0.43
USH1C-204ENST00000526313 FZD9O00144 591 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 FGFR1OPO95684 399 aaKnown RBP17.72■□□□□ 0.43
USH1C-204ENST00000526313 CCDC175P0C221 793 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 LRRC55Q6ZSA7 311 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 LDHDQ86WU2 507 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 CCDC65Q8IXS2 484 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 MYOCDQ8IZQ8 938 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 SYT2Q8N9I0 419 aaPredicted RBP17.72■□□□□ 0.43
USH1C-204ENST00000526313 RETREG2Q8NC44 543 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 DNAJC7Q99615 494 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 FBXO28Q9NVF7 368 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 TTC26A0AVF1 554 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 RASSF10A6NK89 507 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 B4DLN1 442 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 CFBP00751 764 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
USH1C-204ENST00000526313 INPP5BP32019 993 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 KRT9P35527 623 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 ERVK-24P63145 666 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
USH1C-204ENST00000526313 GHRHRQ02643 423 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 FAM26FQ5R3K3 315 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 GPBP1Q86WP2 473 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 GLIS3Q8NEA6 775 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 WDR18Q9BV38 432 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 NUP58Q9BVL2 599 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 KIAA1683Q9H0B3 1180 aa17.72■□□□□ 0.43
USH1C-204ENST00000526313 ZNF536O15090 1300 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 POTEFA5A3E0 1075 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 WDR46O15213 610 aaKnown RBP17.71■□□□□ 0.43
USH1C-204ENST00000526313 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 ZYXQ15942 572 aaKnown RBP17.71■□□□□ 0.43
USH1C-204ENST00000526313 FIGNQ5HY92 759 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 POTEGQ6S5H5 508 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 POTEEQ6S8J3 1075 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 CYP26C1Q6V0L0 522 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 MTERF4Q7Z6M4 381 aaKnown RBP17.71■□□□□ 0.43
USH1C-204ENST00000526313 LPAR1Q92633 364 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 SLC5A5Q92911 643 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 MAP7D2Q96T17 732 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 DESI2Q9BSY9 194 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 MRPL44Q9H9J2 332 aaKnown RBP17.71■□□□□ 0.43
USH1C-204ENST00000526313 DNAI1Q9UI46 699 aa17.71■□□□□ 0.43
USH1C-204ENST00000526313 CTNND1O60716 968 aaKnown RBP17.71■□□□□ 0.42
USH1C-204ENST00000526313 PSMD10O75832 226 aa17.71■□□□□ 0.42
USH1C-204ENST00000526313 ICAM1P05362 532 aa17.71■□□□□ 0.42
USH1C-204ENST00000526313 ZNF76P36508 570 aa17.71■□□□□ 0.42
USH1C-204ENST00000526313 PRELPP51888 382 aa17.71■□□□□ 0.42
USH1C-204ENST00000526313 PSMC6P62333 389 aa17.71■□□□□ 0.42
USH1C-204ENST00000526313 TBC1D8BQ0IIM8 1120 aa17.71■□□□□ 0.42
USH1C-204ENST00000526313 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms