RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CARD11Q9BXL7 1154 aa6.14□□□□□ -1.43
USP48-211ENST00000526044 CRTAC1Q9NQ79 661 aa6.14□□□□□ -1.43
USP48-211ENST00000526044 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP48-211ENST00000526044 YBX2Q9Y2T7 364 aaKnown RBP6.14□□□□□ -1.43
USP48-211ENST00000526044 BACE2Q9Y5Z0 518 aa6.14□□□□□ -1.43
USP48-211ENST00000526044 TAF6LQ9Y6J9 622 aa6.14□□□□□ -1.43
USP48-211ENST00000526044 KIAA1210Q9ULL0 1709 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 AGRPO00253 132 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 NFIBO00712 420 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 ITGAVP06756 1048 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 RBL2Q08999 1139 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 HSF5Q4G112 596 aaPredicted RBP6.13□□□□□ -1.43
USP48-211ENST00000526044 GTF2IRD2BQ6EKJ0 949 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 GTF2IRD2Q86UP8 949 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 JAMLQ86YT9 394 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 SLC6A17Q9H1V8 727 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 STK26Q9P289 416 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 ROCK2O75116 1388 aaKnown RBP6.13□□□□□ -1.43
USP48-211ENST00000526044 NPHP4O75161 1426 aaPredicted RBP6.13□□□□□ -1.43
USP48-211ENST00000526044 PIK3C2GO75747 1445 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 NRXN1Q9ULB1 1477 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 ALKQ9UM73 1620 aa6.13□□□□□ -1.43
USP48-211ENST00000526044 POLR1AO95602 1720 aaPredicted RBP6.13□□□□□ -1.43
USP48-211ENST00000526044 MED14O60244 1454 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 PNLIPP16233 465 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 PRR23BQ6ZRT6 265 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 LCNL1Q6ZST4 164 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 STRCQ7RTU9 1775 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 TRPM1Q7Z4N2 1603 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 CILP2Q8IUL8 1156 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 SREK1Q8WXA9 508 aaKnown RBP6.12□□□□□ -1.43
USP48-211ENST00000526044 JMJD8Q96S16 334 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 PLCD4Q9BRC7 762 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 NKX2-4Q9H2Z4 354 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 CYP26B1Q9NR63 512 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 RAPGEFL1Q9UHV5 662 aa6.12□□□□□ -1.43
USP48-211ENST00000526044 SETBP1Q9Y6X0 1596 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 ADAMTS13Q76LX8 1427 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 METP08581 1390 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 TRBV23OR9-2A0A075B6M9 112 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 A0A1W2PQ27 194 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 A0A1W2PQ64 194 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 A0A1W2PQC6 194 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 A0A1W2PQD8 194 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 EFEMP2O95967 443 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 PRKCAP17252 672 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 GALK1P51570 392 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 SCRN1Q12765 414 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 LAPTM5Q13571 262 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 SLC10A6Q3KNW5 377 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 ZNF227Q86WZ6 799 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 IRF2BP1Q8IU81 584 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 COPS5Q92905 334 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 INTS4Q96HW7 963 aaKnown RBP6.11□□□□□ -1.43
USP48-211ENST00000526044 CCDC140Q96MF4 163 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 LGR4Q9BXB1 951 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 SIRPGQ9P1W8 387 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 POGKQ9P215 609 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 ACSL6Q9UKU0 697 aa6.11□□□□□ -1.43
USP48-211ENST00000526044 IQGAP1P46940 1657 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 LAMC1P11047 1609 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 RALGAPBQ86X10 1494 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 PIK3R4Q99570 1358 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 ST20-MTHFSA0A0A6YYL1 179 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 IQCA1LA6NCM1 817 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 KCNA6P17658 529 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 PAMP19021 973 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 HOXC12P31275 282 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 L1CAMP32004 1257 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 PDE6BP35913 854 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 ARL4AP40617 200 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 CYP4F8P98187 520 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 C1QL4Q86Z23 238 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 NUP43Q8NFH3 380 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 ST13P5Q8NFI4 369 aaPredicted RBP6.1□□□□□ -1.43
USP48-211ENST00000526044 NLGN2Q8NFZ4 835 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 BTN2A2Q8WVV5 523 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 DIRC2Q96SL1 478 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 NSUN3Q9H649 340 aaKnown RBP6.1□□□□□ -1.43
USP48-211ENST00000526044 IMPACTQ9P2X3 320 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 NRXN3Q9Y4C0 1643 aa6.1□□□□□ -1.43
USP48-211ENST00000526044 YTHDC2Q9H6S0 1430 aaKnown RBP6.09□□□□□ -1.43
USP48-211ENST00000526044 LRPPRCP42704 1394 aaKnown RBP6.09□□□□□ -1.43
USP48-211ENST00000526044 GPRASP1Q5JY77 1395 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 ABCC11Q96J66 1382 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 CHD2O14647 1828 aaKnown RBP6.09□□□□□ -1.43
USP48-211ENST00000526044 NPHP3-ACAD11A0A0J9YXS1 232 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 OR14I1A6ND48 311 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 TBX1O43435 398 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 HSPA5P11021 654 aaKnown RBP6.09□□□□□ -1.43
USP48-211ENST00000526044 KIR3DS1Q14943 382 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 TTLL10Q6ZVT0 673 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 SGSM3Q96HU1 749 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 EPB41L4BQ9H329 900 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 DCP1AQ9NPI6 582 aaPredicted RBP6.09□□□□□ -1.43
USP48-211ENST00000526044 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 MSRB2Q9Y3D2 182 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms